Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U35240-1|AAB38521.1|  276|Drosophila melanogaster capping protei...   270   6e-73
AY069829-1|AAL39974.1|  276|Drosophila melanogaster SD07714p pro...   270   6e-73
AE014134-280|AAF51349.1|  276|Drosophila melanogaster CG17158-PA...   270   6e-73
BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p pro...    30   1.7  
BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p pro...    30   1.7  
AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB...    30   1.7  
AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA...    30   1.7  
AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    29   2.9  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    29   2.9  
BT025963-1|ABG02207.1|  694|Drosophila melanogaster IP16182p pro...    29   3.8  
BT023793-1|AAZ41802.1|  633|Drosophila melanogaster GH11127p pro...    29   3.8  
BT003299-1|AAO25059.1|  633|Drosophila melanogaster GH20047p pro...    29   3.8  
AY052064-1|AAK93488.1|  292|Drosophila melanogaster LP10580p pro...    29   3.8  
AF321979-1|AAK15280.1|  967|Drosophila melanogaster fusilli prot...    29   3.8  
AE013599-2092|AAM70984.1|  633|Drosophila melanogaster CG8205-PB...    29   3.8  
AE013599-2091|AAM70983.1|  967|Drosophila melanogaster CG8205-PF...    29   3.8  
AE013599-2090|AAM70982.1|  967|Drosophila melanogaster CG8205-PE...    29   3.8  
AE013599-2089|AAM70981.1|  967|Drosophila melanogaster CG8205-PD...    29   3.8  
AE013599-2088|AAF58117.1|  557|Drosophila melanogaster CG8205-PA...    29   3.8  
AE013599-2087|AAM70980.1|  891|Drosophila melanogaster CG8205-PC...    29   3.8  

>U35240-1|AAB38521.1|  276|Drosophila melanogaster capping protein
           beta protein.
          Length = 276

 Score =  270 bits (663), Expect = 6e-73
 Identities = 121/141 (85%), Positives = 131/141 (92%)
 Frame = +3

Query: 99  MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSSVDQPLKIAXDRSNGKDYL 278
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLSSVDQPLKIA D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 279 LCDYNRDGDSYRSPWSNTYDPPLDDGSMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 458
           LCDYNRDGDSYRSPWSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 459 LWDMDHGFAGVILIKKAGDGS 521
           LWD+DHGFA VILIKKAGDGS
Sbjct: 121 LWDLDHGFAAVILIKKAGDGS 141


>AY069829-1|AAL39974.1|  276|Drosophila melanogaster SD07714p
           protein.
          Length = 276

 Score =  270 bits (663), Expect = 6e-73
 Identities = 121/141 (85%), Positives = 131/141 (92%)
 Frame = +3

Query: 99  MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSSVDQPLKIAXDRSNGKDYL 278
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLSSVDQPLKIA D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 279 LCDYNRDGDSYRSPWSNTYDPPLDDGSMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 458
           LCDYNRDGDSYRSPWSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 459 LWDMDHGFAGVILIKKAGDGS 521
           LWD+DHGFA VILIKKAGDGS
Sbjct: 121 LWDLDHGFAAVILIKKAGDGS 141


>AE014134-280|AAF51349.1|  276|Drosophila melanogaster CG17158-PA
           protein.
          Length = 276

 Score =  270 bits (663), Expect = 6e-73
 Identities = 121/141 (85%), Positives = 131/141 (92%)
 Frame = +3

Query: 99  MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSSVDQPLKIAXDRSNGKDYL 278
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLSSVDQPLKIA D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 279 LCDYNRDGDSYRSPWSNTYDPPLDDGSMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 458
           LCDYNRDGDSYRSPWSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 459 LWDMDHGFAGVILIKKAGDGS 521
           LWD+DHGFA VILIKKAGDGS
Sbjct: 121 LWDLDHGFAAVILIKKAGDGS 141


>BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p
           protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 327 STKETYRSHRRDCNRIINSLSRCYDXEQSL 238
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p
           protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 327 STKETYRSHRRDCNRIINSLSRCYDXEQSL 238
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB,
           isoform B protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 327 STKETYRSHRRDCNRIINSLSRCYDXEQSL 238
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA,
           isoform A protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 327 STKETYRSHRRDCNRIINSLSRCYDXEQSL 238
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = +3

Query: 156 QIEKNLTDLIDLVPSMCDDLLSSVDQPL--KIAXDRSNGKDYLLCDYNRD----GDSYRS 317
           Q++  L +L +L       ++ + + P+  K++ +  + KD++LC+   D    GD   S
Sbjct: 83  QLKTELPELPELTEPEPALVVWNTESPIEPKLSYEGDDIKDHILCEPVIDALSAGDEKDS 142

Query: 318 PWSNTYDPPLDDGSMPSE 371
            + +T++P  +  S P E
Sbjct: 143 DYGDTFEPDFEPESQPDE 160


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = +3

Query: 156 QIEKNLTDLIDLVPSMCDDLLSSVDQPL--KIAXDRSNGKDYLLCDYNRD----GDSYRS 317
           Q++  L +L +L       ++ + + P+  K++ +  + KD++LC+   D    GD   S
Sbjct: 83  QLKTELPELPELTEPEPALVVWNTESPIEPKLSYEGDDIKDHILCEPVIDALSAGDEKDS 142

Query: 318 PWSNTYDPPLDDGSMPSE 371
            + +T++P  +  S P E
Sbjct: 143 DYGDTFEPDFEPESQPDE 160


>BT025963-1|ABG02207.1|  694|Drosophila melanogaster IP16182p
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


>BT023793-1|AAZ41802.1|  633|Drosophila melanogaster GH11127p
           protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 273 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 304


>BT003299-1|AAO25059.1|  633|Drosophila melanogaster GH20047p
           protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 273 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 304


>AY052064-1|AAK93488.1|  292|Drosophila melanogaster LP10580p
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 50  QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 81


>AF321979-1|AAK15280.1|  967|Drosophila melanogaster fusilli
           protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


>AE013599-2092|AAM70984.1|  633|Drosophila melanogaster CG8205-PB,
           isoform B protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 273 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 304


>AE013599-2091|AAM70983.1|  967|Drosophila melanogaster CG8205-PF,
           isoform F protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


>AE013599-2090|AAM70982.1|  967|Drosophila melanogaster CG8205-PE,
           isoform E protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


>AE013599-2089|AAM70981.1|  967|Drosophila melanogaster CG8205-PD,
           isoform D protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


>AE013599-2088|AAF58117.1|  557|Drosophila melanogaster CG8205-PA,
           isoform A protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 273 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 304


>AE013599-2087|AAM70980.1|  891|Drosophila melanogaster CG8205-PC,
           isoform C protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 369 QRAWSHHLMVGRKYSTKETYRSHRRDCNRIIN 274
           QR  +H++M G+KY   E ++    D N ++N
Sbjct: 607 QRRHNHYMMFGKKYRYIEVFQCSGDDMNMVLN 638


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,470,474
Number of Sequences: 53049
Number of extensions: 422180
Number of successful extensions: 892
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)