Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314F10f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 142 4e-35
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 95 4e-21
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 72 5e-14
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 38 7e-04
SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces... 33 0.020
SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce... 31 0.079
SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate |Schizosacc... 29 0.42
SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 29 0.56
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 29 0.56
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 25 6.8
SPBC1539.01c |||mitochondrial ribosomal protein subunit L15|Schi... 25 6.8
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 142 bits (343), Expect = 4e-35
Identities = 67/144 (46%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G +++VHK E +++SRIVYYL N+ R+I+L+RHGES N+ G+IGGDS LSP+G +Y
Sbjct: 179 GAELIVHKLENYLESRIVYYLSNLRTRRRSIWLSRHGESQFNVEGKIGGDSSLSPQGLKY 238
Query: 198 ARALSAYIEQQRI--PGLRVWTSWMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAE 371
A L Y+ + I GL VWTS M R IQT + + + W+AL+E+DAG C+ TY
Sbjct: 239 AALLPEYVAKFSIGEKGLTVWTSSMARTIQTARHLNCQKLEWRALDELDAGTCDGFTYDY 298
Query: 372 IQEKYPSDFNSRDANKFAYRYPRG 443
I++ +P + R+ +KF YRY G
Sbjct: 299 IEQNFPHEAELRNNDKFHYRYRGG 322
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 95.5 bits (227), Expect = 4e-21
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 25/164 (15%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G KVV H EG + + VY+++N++I R I+LTR GESL + GRIGGD+ L+P G QY
Sbjct: 330 GIKVVTHNIEGFLAGQAVYFMLNLNIQKRQIWLTRPGESLDTVAGRIGGDASLTPIGKQY 389
Query: 198 ARALSAYIEQQRI----------------------PGLRVWTSWMRRAIQTVKDVKAPQ- 308
A+ L+ ++++QR+ VW+S +RAI+T++
Sbjct: 390 AQDLANFMDRQRVLWQLRYTNDLASTNKRFSLSEASSFNVWSSVRKRAIETIEFFNPDSY 449
Query: 309 --ERWKALNEIDAGICEEMTYAEIQEKYPSDFNSRDANKFAYRY 434
++ + LN+++ G E +T E EKYP +F+ +AYR+
Sbjct: 450 NVKKIRLLNDLNLGSREGLTLREFSEKYPDEFDVIKRKDYAYRF 493
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 72.1 bits (169), Expect = 5e-14
Identities = 30/72 (41%), Positives = 52/72 (72%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G+KVV G + + V++L+N ++ PR I++TRHGES+ N+ GRIGG++ L+P G Q+
Sbjct: 181 GKKVVAFNIRGFLAGQAVFFLLNFNLSPRQIWVTRHGESVDNVRGRIGGNAELTPLGRQF 240
Query: 198 ARALSAYIEQQR 233
+ L+ +I+++R
Sbjct: 241 SEDLALFIDEKR 252
Score = 61.3 bits (142), Expect = 9e-11
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = +3
Query: 249 VWTSWMRRAIQTVKDVKAPQERWKA---LNEIDAGICEEMTYAEIQEKYPSDFNSRDANK 419
VWTS M+R+IQT Q KA LNEI +GIC+ +TY EI+ YP ++ +R +K
Sbjct: 316 VWTSMMQRSIQTAAYFDEEQYDIKAMRMLNEICSGICDGLTYEEIKSIYPKEYEARKLDK 375
Query: 420 FAYRYP 437
YRYP
Sbjct: 376 LNYRYP 381
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 38.3 bits (85), Expect = 7e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 102 RTIYLTRHGESLHNL---VGRIGGDSPLSPRGCQYARALSAYIEQQRIPGLRVWTSWMRR 272
+T+YL RHG++ HN+ D L+ G + AL+ +E ++IP + S MRR
Sbjct: 7 KTVYLIRHGQAQHNVGPDEDHNIRDPVLTSEGIEQCEALAKELESKQIPIDGIVCSPMRR 66
Query: 273 AIQTVK 290
+QT++
Sbjct: 67 TLQTME 72
>SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 33.5 bits (73), Expect = 0.020
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 96 VPRTIYLTRHGESLH----NLVGRIGGDSPLSPRGCQYARALSAYIEQQRIPGLRVWTSW 263
+ +TIY RHG+ H N V R D L+ G + A L ++ +++P + S
Sbjct: 6 IDKTIYFVRHGQVSHDVDENGVHR-EHDPLLNDEGRKQALQLQHDLDAEKLPIELILVSP 64
Query: 264 MRRAIQTVK 290
MRRA++T+K
Sbjct: 65 MRRALETMK 73
>SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 282
Score = 31.5 bits (68), Expect = 0.079
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 105 TIYLTRHGESLHNLVG-RIGG--DSPLSPRGCQYARALSAYIEQQRIPGLRVWTSWMRRA 275
T L RH ES HN+ G R G DS L+ G A+ L+ I I + V++S +RA
Sbjct: 55 TCLLVRHAESEHNVRGIRAGARIDSELTVHGYNQAKKLAKSIRNLDI--VCVYSSPQKRA 112
Query: 276 IQTVKDV 296
+T +++
Sbjct: 113 KRTAEEI 119
>SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 211
Score = 29.1 bits (62), Expect = 0.42
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 81 MNIHIVPRTIYLTRHGESLHNLVGRIGG--DSPLSPRGCQYARALSAYIEQQRIPGLRVW 254
M P + LTRHGES N + G D LS G + A+ ++ + +
Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAF 60
Query: 255 TSWMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPSD---FNSRDANK 419
TS ++RA +T + + L E+ E + ++ E+Y D N DA K
Sbjct: 61 TSALQRAQKTCQII---------LEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARK 109
>SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 28.7 bits (61), Expect = 0.56
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 RHGESLHNLVGRIGGDSPLSPRGCQYARALSAYIEQQRIPGLRVWTSWMRRAIQTVKDVK 299
R+GE L++LV GGD+ L P+ ++ +S + ++RI ++ ++ K
Sbjct: 130 RNGEVLYHLVSTTGGDTFLRPKFWPQSQRISGML-KKRITMKENKHRLIQSMSCMLRHAK 188
Query: 300 APQERWKA-LNEIDAGICEEM 359
E KA ++E D G +E+
Sbjct: 189 LEDEFMKAYISEEDVGYADEI 209
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 28.7 bits (61), Expect = 0.56
Identities = 12/33 (36%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 EKVVVHK-HEGHIQSRIVYYLMNIHIVPRTIYL 116
E ++ +K +EG++ SRI++ LMN+ + + I+L
Sbjct: 233 ETIIANKSNEGYLLSRILFLLMNMTLARKRIFL 265
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 68 CVLLDEHTYCTQNYISD 118
C+L DEH + +NYI +
Sbjct: 265 CILWDEHDFYCRNYIKE 281
>SPBC1539.01c |||mitochondrial ribosomal protein subunit
L15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 50 THTESDCVLLDEHTYCTQNYISDKARRE 133
T TE D + +NYISDK+ RE
Sbjct: 45 TSTEEDIDSFFSRVFGEKNYISDKSLRE 72
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,673,701
Number of Sequences: 5004
Number of extensions: 28499
Number of successful extensions: 96
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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