Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314F10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0466 + 3702771-3703016,3703133-3703196,3703757-3704055,370... 137 6e-33
03_02_0658 + 10228794-10228943,10229042-10229105,10229510-102298... 74 8e-14
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 31 0.74
12_01_0498 - 3955300-3955317,3955399-3955503,3955600-3955677,395... 29 1.7
04_01_0007 + 168423-168485,168590-168697,169662-169741,170497-17... 29 1.7
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 29 1.7
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 29 1.7
05_01_0300 + 2340251-2340791,2340892-2341325 29 2.3
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 29 2.3
11_01_0309 + 2312786-2313211,2313311-2313527,2313613-2313731,231... 28 4.0
01_06_0311 - 28377414-28377623,28377758-28377856,28378116-283782... 28 5.2
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 27 6.9
06_03_0933 + 26067109-26067232,26067334-26067486,26068929-260692... 27 6.9
06_02_0278 - 13697682-13697984 27 6.9
03_05_0009 - 19608085-19608441 27 6.9
08_02_1129 - 24513568-24514296,24515380-24515817 27 9.1
03_06_0677 + 35476009-35476014,35476974-35477474,35477574-354777... 27 9.1
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 27 9.1
>05_01_0466 +
3702771-3703016,3703133-3703196,3703757-3704055,
3704666-3704881,3705216-3705422,3705697-3705789,
3706098-3706196,3706300-3706329,3706885-3706938,
3707533-3707586,3707658-3707735,3707927-3708018,
3708093-3708150,3708248-3708322,3708930-3708977,
3709131-3709228,3709446-3709521,3709659-3709721,
3709810-3709901,3710207-3710275,3710410-3710473,
3710545-3710610,3710700-3710777
Length = 772
Score = 137 bits (331), Expect = 6e-33
Identities = 64/146 (43%), Positives = 99/146 (67%), Gaps = 3/146 (2%)
Frame = +3
Query: 15 RGEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQ 194
+G ++ V+ G++ RIV++L+N H+ PR I LTRHGESLHN+ GR+GGD+ LS G
Sbjct: 550 QGGQLQVNNISGYLPGRIVFFLVNSHLTPRPILLTRHGESLHNVRGRVGGDTVLSEDGEL 609
Query: 195 YARALSAYIEQ--QRIPGLRVWTSWMRRAIQTVKDVKA-PQERWKALNEIDAGICEEMTY 365
Y++ L+ +IE+ + +WTS ++R I T + P+ +W+AL+EI++G+C+ MTY
Sbjct: 610 YSKKLANFIEKRLKSEKTASIWTSTLQRTILTASPIVGFPKIQWRALDEINSGVCDGMTY 669
Query: 366 AEIQEKYPSDFNSRDANKFAYRYPRG 443
EI++ P +F SR +K YRYPRG
Sbjct: 670 EEIKKVMPEEFESRKKDKLRYRYPRG 695
>03_02_0658 +
10228794-10228943,10229042-10229105,10229510-10229805,
10230689-10230904,10231409-10231549,10232407-10232499,
10234010-10234108,10234198-10234227,10234274-10234360,
10234636-10234689,10234758-10234835,10235128-10235202,
10236265-10236356,10236433-10236490,10236590-10236664,
10236966-10237013,10239003-10239065,10239167-10239258,
10239693-10239761,10239867-10239930,10240007-10240072,
10240170-10240271
Length = 703
Score = 73.7 bits (173), Expect = 8e-14
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 207 LSAYIEQQRIPGLRVWTSWMRRAIQTVKDVKA-PQERWKALNEIDAGICEEMTYAEIQEK 383
+S Y+ RI +WTS ++R+I T + + P+ +W+AL+EI+AGIC+ MTY EI++
Sbjct: 540 ISGYLPG-RIVFFLIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDGMTYDEIKKI 598
Query: 384 YPSDFNSRDANKFAYRYPRG 443
P ++ SR +K YRYPRG
Sbjct: 599 KPEEYESRSKDKLRYRYPRG 618
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 252 WTSWMRRAIQTVKDVKAPQERWKALN--EIDAGICEEMTYAEIQEKYPSDFNS 404
W++ M+ A+Q+ QE W ++N D +MT +++++ + NS
Sbjct: 328 WSALMQEALQSTSSKNGLQEEWSSVNFQNRDQAFTNKMTSPDLEQRQHATLNS 380
>12_01_0498 -
3955300-3955317,3955399-3955503,3955600-3955677,
3955764-3955838,3956339-3956425,3956507-3956574,
3957604-3957691,3957794-3957894,3957967-3958087,
3958434-3958556,3958687-3958752
Length = 309
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 PGLRVWTS-WMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPSD 395
PG + WTS W++ KD+K ++ + DA + E+ ++ EKY +D
Sbjct: 225 PGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAAD 278
>04_01_0007 +
168423-168485,168590-168697,169662-169741,170497-170548,
171112-171200,171756-171875,172204-172248,172352-172436
Length = 213
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 102 RTIYLTRHGESLHNLVGRIGGDSPLSPR 185
+TIYL RH + +HN+ G + +SP+
Sbjct: 17 KTIYLVRHAQGVHNVEGEKDHSAYMSPQ 44
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 45 EGHIQSRIVYYLMNIHIVPRTIYL-TRHGESLHNLVGRIGGDSPLSPRGCQYARALSAYI 221
EG + + L N +VP Y+ + HNLV G +S +SP +++AY
Sbjct: 167 EGSTEHETQHPLQNSELVPPDKYVPSEDAGQAHNLVASDGAESLVSPLSNSTEPSIAAYD 226
Query: 222 EQQRIPGL 245
++ G+
Sbjct: 227 SPDKLYGV 234
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 237 PGLRVWT-SWMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPSD 395
PG + WT W++ KD+K +++ + DA + E+ ++ EKY D
Sbjct: 273 PGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAED 326
>05_01_0300 + 2340251-2340791,2340892-2341325
Length = 324
Score = 29.1 bits (62), Expect = 2.3
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Frame = +3
Query: 96 VPRTIYLTRHGESLHNLVGRIGGDS-----PLSPRGCQYARALSAYIEQ--QRIPGLRV- 251
+P+ I L RHGES NL + PL+P G ARA I +V
Sbjct: 42 LPKRIILVRHGESQGNLDMSAYTTTPDYRIPLTPLGVDQARAAGKGILDVVSSAANWKVY 101
Query: 252 -WTSWMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYA--EIQEKYPSDFNSRDA-NK 419
+ S R T++++ A R + + + E + +++E+ + +RD +
Sbjct: 102 FYVSPYERTRATLREIGAAFPRHRVIGAREECRVREQDFGNFQVEERMRAVKETRDRFGR 161
Query: 420 FAYRYPRG 443
F +R+P G
Sbjct: 162 FFFRFPEG 169
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 150 GRIGGDSPLSPRGCQYARALSAYIEQQRIPGLRVW 254
GR GG PRG + + LS IE++ +PGLR++
Sbjct: 955 GRYGG----RPRGRKPRKNLSETIEEEEVPGLRLY 985
>11_01_0309 +
2312786-2313211,2313311-2313527,2313613-2313731,
2313921-2314019,2314498-2314551,2314635-2314733,
2314838-2314945,2315418-2315694,2316051-2316160,
2316425-2316493,2316608-2316714,2316754-2316792,
2317126-2317171,2317593-2317619
Length = 598
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 102 RTIYLTRHGESLHNLVGRIGGDSPLS 179
+ + L RHG+S N GRI G S +S
Sbjct: 54 KRVVLVRHGQSTWNAEGRIQGSSDIS 79
>01_06_0311 -
28377414-28377623,28377758-28377856,28378116-28378253,
28378697-28378827,28378920-28379066,28379164-28379293,
28379625-28379654,28380138-28380416
Length = 387
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 159 RCARPGCAGSRRA 121
R ARPGCAG RRA
Sbjct: 21 RLARPGCAGGRRA 33
>12_01_0151 -
1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 152 PDQVVQALAVPCQIYSSGYNMYVHQVV 72
PD + Q V C I+ GY +Y HQ++
Sbjct: 320 PDHLKQCF-VYCSIFPKGYKIYKHQLI 345
>06_03_0933 +
26067109-26067232,26067334-26067486,26068929-26069279,
26069375-26069451,26069665-26070982,26071948-26072009,
26072253-26072309
Length = 713
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 216 YIEQQRIPG-LRVWTSWMRR-AIQTVKDVKAPQERWKALNEIDA--GICEEMTYAEIQEK 383
Y+ ++ I L+ + +++R + QT D E+WK +NE+DA CE Y
Sbjct: 224 YMTRENIASHLQKYRLYLKRISTQTGMDPDQFPEKWKYMNELDALKNYCENGRY----RL 279
Query: 384 YPSDFNSRDANKFA 425
P+ +S +N FA
Sbjct: 280 TPAIASSSSSNPFA 293
>06_02_0278 - 13697682-13697984
Length = 100
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 252 WTSWMRRAIQTVKDVKAPQERWKALNEIDAG 344
WT R +I V A ++RW+A ++I G
Sbjct: 17 WTQAPRHSIGVSSRVSASEDRWRAPHDIQTG 47
>03_05_0009 - 19608085-19608441
Length = 118
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 269 PRHTDGQGRQGAAGEVEGPQRDRRGHM*RDDIR*DTREVPVG 394
PR G+G++G V G +R RR ++ D + R G
Sbjct: 26 PREERGEGKRGVGSPVAGRRRSRRRNVFPSDAHPEKRSASEG 67
>08_02_1129 - 24513568-24514296,24515380-24515817
Length = 388
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 196 YWQPRGDSGLSPPMRPTRLCRLSPCLVRY 110
Y P L P R T CR+ PC++ Y
Sbjct: 53 YSDPDSLVSLWGPKRDTSRCRIPPCMIEY 81
>03_06_0677 +
35476009-35476014,35476974-35477474,35477574-35477762,
35477925-35477945
Length = 238
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 266 APRHTDGQGRQGAAGEVEGPQRDRRGHM 349
+P H Q R G V P RDRRG +
Sbjct: 117 SPVHPRHQARAANKGGVSSPSRDRRGSL 144
>03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 8 RHEGRKGGRSQA*RTHTESDCVLLDEHTYCTQ--NYISDKARRE 133
R+ GR GRS + R+ SD DE+ Y Q +Y +D R E
Sbjct: 1148 RNPGRSYGRSHSERSGIRSDRQAADENQYDRQRRSYRNDSYRHE 1191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,390,882
Number of Sequences: 37544
Number of extensions: 232546
Number of successful extensions: 834
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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