Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314F10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 172 1e-43
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 169 1e-42
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 169 1e-42
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF040659-7|AAK39390.2| 153|Caenorhabditis elegans Hypothetical ... 29 2.7
AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical... 28 3.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 6.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 6.2
Z30317-3|CAA82969.1| 930|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 6.2
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 27 8.1
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 27 8.1
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 172 bits (418), Expect = 1e-43
Identities = 76/144 (52%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G VH+ GH+QSR+VY+LMNIH++PR+IYLTRHG+S +N +GR+GGDSPL+ G +Y
Sbjct: 218 GRSFKVHQVRGHVQSRVVYFLMNIHLLPRSIYLTRHGQSEYNAMGRLGGDSPLTEDGQKY 277
Query: 198 ARALSAYIEQQRIPGLRVWTSWMRRAIQTVKDVKAP--QERWKALNEIDAGICEEMTYAE 371
A AL+ + E++ +PGLRVW S RA QT + +K E WKAL+E+DAGICE +TY +
Sbjct: 278 ASALADFFEEEEVPGLRVWCSQKVRAAQTAQHLKPDFHTEYWKALDELDAGICEGLTYED 337
Query: 372 IQEKYPSDFNSRDANKFAYRYPRG 443
I ++YP + R +K+ YRYP G
Sbjct: 338 ILQRYPKQADDRATDKYHYRYPSG 361
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 169 bits (411), Expect = 1e-42
Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G+ VH GH+QSR+VY+LMNIH++PR+IYL+RHGES +N +GR+GGDSPLS G Y
Sbjct: 219 GKSFYVHNVNGHVQSRVVYFLMNIHLLPRSIYLSRHGESEYNRIGRLGGDSPLSENGLNY 278
Query: 198 ARALSAYIEQQRIPGLRVWTSWMRRAIQT---VKDVKAPQERWKALNEIDAGICEEMTYA 368
A L Y E++ + RVW+S RA QT +KD+ E WK L+EIDAGICE +TY
Sbjct: 279 AGKLREYFEKEDLDDFRVWSSQKIRAAQTASHLKDLAGHTEFWKCLDEIDAGICEGLTYE 338
Query: 369 EIQEKYPSDFNSRDANKFAYRYPRG 443
+ + +YP F RD +K+ YRYP G
Sbjct: 339 DFEARYPKQFAERDKDKYHYRYPSG 363
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 169 bits (411), Expect = 1e-42
Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Frame = +3
Query: 18 GEKVVVHKHEGHIQSRIVYYLMNIHIVPRTIYLTRHGESLHNLVGRIGGDSPLSPRGCQY 197
G+ VH GH+QSR+VY+LMNIH++PR+IYL+RHGES +N +GR+GGDSPLS G Y
Sbjct: 225 GKSFYVHNVNGHVQSRVVYFLMNIHLLPRSIYLSRHGESEYNRIGRLGGDSPLSENGLNY 284
Query: 198 ARALSAYIEQQRIPGLRVWTSWMRRAIQT---VKDVKAPQERWKALNEIDAGICEEMTYA 368
A L Y E++ + RVW+S RA QT +KD+ E WK L+EIDAGICE +TY
Sbjct: 285 AGKLREYFEKEDLDDFRVWSSQKIRAAQTASHLKDLAGHTEFWKCLDEIDAGICEGLTYE 344
Query: 369 EIQEKYPSDFNSRDANKFAYRYPRG 443
+ + +YP F RD +K+ YRYP G
Sbjct: 345 DFEARYPKQFAERDKDKYHYRYPSG 369
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 107 SSGYNMYVHQVVHNPTLYVSFMLVNDHLF 21
S G +Y + HN T YV+F L++ HLF
Sbjct: 500 SDGLILYHGVMQHNATDYVAFELIDSHLF 528
>AF040659-7|AAK39390.2| 153|Caenorhabditis elegans Hypothetical
protein ZK484.6 protein.
Length = 153
Score = 28.7 bits (61), Expect = 2.7
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Frame = +3
Query: 102 RTIYLTRHGESLHNLVGRIGG-------DSPLSPRGCQYARALSAYIEQQRIPGLRVWTS 260
RTI+L RHG+ + N+ + D L+ RG Q A + + I + V S
Sbjct: 3 RTIWLVRHGQRVDNVDKKWKANNDAKWDDPELTLRGKQQAHEVGKHFANMNIEAIVV--S 60
Query: 261 WMRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPS 392
R I+T + A E KA ++ G+ E + + PS
Sbjct: 61 PFTRCIETAAQIVAMMEN-KAKICVEPGLMEPLYLCKNPPTIPS 103
>AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical
protein Y73B3A.16 protein.
Length = 277
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 157 MRPTRLCRLSPCLVRYIVLGTICMFIK*YTIRLCM 53
++P +C S C+ + V G +C FI+ T +C+
Sbjct: 91 LKPENICFFSSCIFKTTVTGNVC-FIQPSTFHVCV 124
>Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical
protein K10H10.6 protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = +3
Query: 183 RGCQYARALSAYI----EQQRIPGLRVWTS-WMRRAI--QTVKDVKAPQERWKALNEIDA 341
+ C A + Y E ++I G + W S W I +T +D + + WK L E+D
Sbjct: 248 KNCSQGAATTVYCATHPEVEKISG-KYWESCWDNDKIDKKTARDEELQEALWKKLEELDD 306
Query: 342 GICEEMT 362
GI ++T
Sbjct: 307 GINGQVT 313
>Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical
protein Y62H9A.14 protein.
Length = 331
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 264 MRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPSDFNSRDANKFAYRYPRG 443
+R + + KA +E W L EI EE + E+ YP F+ F Y R
Sbjct: 57 LRDSAWSALSAKALEEDWSHLCEIPIAGSEEYGFKELVRIYPEKFDWSMIGTFLTEYCRA 116
Query: 444 XL 449
+
Sbjct: 117 SI 118
>AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical
protein Y62H9A.14 protein.
Length = 331
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 264 MRRAIQTVKDVKAPQERWKALNEIDAGICEEMTYAEIQEKYPSDFNSRDANKFAYRYPRG 443
+R + + KA +E W L EI EE + E+ YP F+ F Y R
Sbjct: 57 LRDSAWSALSAKALEEDWSHLCEIPIAGSEEYGFKELVRIYPEKFDWSMIGTFLTEYCRA 116
Query: 444 XL 449
+
Sbjct: 117 SI 118
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 187 PRGDSGLSPPMRPTRLCRLSPCL 119
P D G PP P R+CRL+ CL
Sbjct: 2164 PYRDEG--PPQSPGRICRLNECL 2184
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 187 PRGDSGLSPPMRPTRLCRLSPCL 119
P D G PP P R+CRL+ CL
Sbjct: 2748 PYRDEG--PPQSPGRICRLNECL 2768
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 187 PRGDSGLSPPMRPTRLCRLSPCL 119
P D G PP P R+CRL+ CL
Sbjct: 2164 PYRDEG--PPQSPGRICRLNECL 2184
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 187 PRGDSGLSPPMRPTRLCRLSPCL 119
P D G PP P R+CRL+ CL
Sbjct: 2748 PYRDEG--PPQSPGRICRLNECL 2768
>Z30317-3|CAA82969.1| 930|Caenorhabditis elegans Hypothetical
protein T16G12.6 protein.
Length = 930
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 96 VPRTIYLTRHGESLHNLVGRIGGDSP-LSPRGCQYARALSAYIEQQRIPGLRVWTSW 263
+P ++T E + + I D LS G YA+ L I++ P +W SW
Sbjct: 346 LPSIYFITLRTEIMQTINSGIQIDKQILSQIGQIYAKILEMSIKKLAFPSKEIWLSW 402
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 187 PRGDSGLSPPMRPTRLCRLSPCL 119
P D G PP P R+CRL+ CL
Sbjct: 2748 PYRDEG--PPQSPGRICRLNECL 2768
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
protein LIN-59 protein.
Length = 1312
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 119 CQIYSSGYNMYVHQVVHNPTLYVSFMLVNDH 27
C Y S N QVV N T+YV+ +L DH
Sbjct: 1050 CDYYRSLINRRGIQVVLNETVYVNRVLPEDH 1080
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 119 CQIYSSGYNMYVHQVVHNPTLYVSFMLVNDH 27
C Y S N QVV N T+YV+ +L DH
Sbjct: 1050 CDYYRSLINRRGIQVVLNETVYVNRVLPEDH 1080
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,571,924
Number of Sequences: 27780
Number of extensions: 172596
Number of successful extensions: 584
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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