Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    25   0.36 
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    25   0.36 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   0.82 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   5.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.7  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 181 GDSGLSPPMRPTRLCR 134
           G++ L PP RPTRL R
Sbjct: 18  GNTNLDPPTRPTRLRR 33


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 181 GDSGLSPPMRPTRLCR 134
           G++ L PP RPTRL R
Sbjct: 19  GNTNLDPPTRPTRLRR 34


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 133 LSPCLVRYIVLGTICMFIK*YTIRLCMC 50
           + PC  +Y  +G  C      TI +C+C
Sbjct: 79  IDPCASKYCGIGKECELSPNSTIAVCVC 106


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 181 GDSGLSPPMRPTRLCR 134
           G++ L PP RP RL R
Sbjct: 19  GNTNLDPPTRPARLRR 34


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LVGVAGVEVRRVLLLYLSVCHLFTYARV 336
           +V  +G E+  VLL  + +C+L T+A V
Sbjct: 686 VVRASGRELSYVLLSGILLCYLVTFALV 713


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 66  IVYYLMNIHIVPRTIY 113
           +VY +M I  +PR IY
Sbjct: 407 LVYIIMLIIFIPRNIY 422


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 288 KDVKAPQERWKALNEIDAGICEEMTYAEIQ--EKYPSDF 398
           K V+A  E+      +D  +C+  TY  +Q   K P +F
Sbjct: 557 KLVQAAFEQNTTDQSMDIDVCDNQTYTSLQMAMKNPIEF 595


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 235  MRCCSM*AESARAYWQP 185
            +RC ++ ++S +  WQP
Sbjct: 1118 VRCAALTSQSLQVSWQP 1134


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 235  MRCCSM*AESARAYWQP 185
            +RC ++ ++S +  WQP
Sbjct: 1114 VRCAALTSQSLQVSWQP 1130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,815
Number of Sequences: 438
Number of extensions: 2350
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)