Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.0  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 446 SNYNSLAVVLQRRDW 490
           SN NSL + L+R+ W
Sbjct: 148 SNVNSLTLTLKRKKW 162


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 446 SNYNSLAVVLQRRDW 490
           SN NSL + L+R+ W
Sbjct: 74  SNVNSLTLTLKRKKW 88


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 17  ILYVTGLSLNSXILKITIFYNIYWXKYNICSTTFFRFSWNTST 145
           + Y   +   S  +  T FY I    YN+  TTF  F +N ++
Sbjct: 231 VFYSKIIISGSIFMTTTSFYRILNSGYNL--TTFGSFIFNANS 271


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 322 NLPPAXHSYNELPILXSCKL 381
           N PP+  + +ELP L S KL
Sbjct: 69  NSPPSPPAPSELPALKSRKL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,187
Number of Sequences: 336
Number of extensions: 1645
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)