Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr...    28   4.7  
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion...    28   4.7  
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion...    28   4.7  
AF022974-9|AAC48035.3|  566|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z82264-4|CAB05162.1|  491|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
            presynaptic activity protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 419  PXPNSPYRESNYNSLAVVLQRRDWEN 496
            P PN P R   Y  L + +Q + W+N
Sbjct: 1064 PTPNEPVRHYIYQELILAVQHQIWQN 1089


>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform b protein.
          Length = 1408

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 419  PXPNSPYRESNYNSLAVVLQRRDWEN 496
            P PN P R   Y  L + +Q + W+N
Sbjct: 1064 PTPNEPVRHYIYQELILAVQHQIWQN 1089


>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
            defective protein3, isoform a protein.
          Length = 1409

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 419  PXPNSPYRESNYNSLAVVLQRRDWEN 496
            P PN P R   Y  L + +Q + W+N
Sbjct: 1064 PTPNEPVRHYIYQELILAVQHQIWQN 1089


>AF022974-9|AAC48035.3|  566|Caenorhabditis elegans Hypothetical
           protein F26G5.1 protein.
          Length = 566

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 328 PPAXHSYNELPILXSCKLE 384
           PPA HS  ELP+L S K E
Sbjct: 111 PPADHSNKELPLLKSSKSE 129


>Z82264-4|CAB05162.1|  491|Caenorhabditis elegans Hypothetical
           protein C49C3.9 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 2   IVLTDILYVTGLSLNSXILKITIFYNIYWXKYNICSTTFFRFSWNTSTDMSDYA 163
           I++   +YV   S  +    +T+FY+I     N   TT+   S+    +++ YA
Sbjct: 253 IIIVPSVYVNNTSTYTATNGLTVFYDIANPLLNTVGTTYRNISFRGDGEVTIYA 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,090,894
Number of Sequences: 27780
Number of extensions: 143001
Number of successful extensions: 297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)