Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   127   5e-30
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   103   6e-23
AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical ...    28   3.5  
AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical ...    28   3.5  
U88314-11|AAP68950.1|  241|Caenorhabditis elegans Hypothetical p...    28   4.7  
U88314-10|AAP68949.1|  344|Caenorhabditis elegans Hypothetical p...    28   4.7  
AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine re...    28   4.7  
Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical p...    27   6.2  
AF040644-2|AAN63399.1|  963|Caenorhabditis elegans Gamma-tubulin...    27   8.1  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  127 bits (306), Expect = 5e-30
 Identities = 58/85 (68%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   AKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEV 182
           ++DYGV  ED G   RGLFIID    LRQIT+NDLPVGRSVDETLRLVQAFQ+ + HGEV
Sbjct: 110 SRDYGVLKEDEGIAFRGLFIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEV 169

Query: 183 CPAGWKPGQDTIIPNPSEKKKYFEK 257
           CPAGW PG DTI P   E ++YF+K
Sbjct: 170 CPAGWTPGSDTIKPGVKESQEYFKK 194


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  103 bits (248), Expect = 6e-23
 Identities = 47/86 (54%), Positives = 60/86 (69%)
 Frame = +3

Query: 3   AKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEV 182
           A  +GV  ++ G + RGLF+ID  G +R  T NDLPVGRSVDETLR+++AFQ++D HGEV
Sbjct: 139 ADSFGVLDKESGLSYRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEV 198

Query: 183 CPAGWKPGQDTIIPNPSEKKKYFEKV 260
           CPA W     TI P  +  K+YF KV
Sbjct: 199 CPADWHEDSPTIKPGVATSKEYFNKV 224


>AC006631-1|AAF39793.2|  787|Caenorhabditis elegans Hypothetical
           protein F27B3.5 protein.
          Length = 787

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -1

Query: 266 FSNLFKIFLLLRRIWYNCVLTRFPACWANFTMIISILECLNKSQCFIN*TSYWQI 102
           FS +F +  L+ R++    +           +++S LE   KSQCFI   ++ +I
Sbjct: 168 FSEIFYLMSLIMRVFQKVKINSMHVLDDYIKILVSQLEPFLKSQCFITTDAFQKI 222


>AC006607-9|AAF60368.2|  995|Caenorhabditis elegans Hypothetical
           protein C09E7.7 protein.
          Length = 995

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -1

Query: 266 FSNLFKIFLLLRRIWYNCVLTRFPACWANFTMIISILECLNKSQCFIN*TSYWQI 102
           FS +F +  L+ R++    +           +++S LE   KSQCFI   ++ +I
Sbjct: 375 FSEIFYLMSLIMRVFQKVKINSMHVLDDYIKILVSQLEPFLKSQCFITTDAFQKI 429


>U88314-11|AAP68950.1|  241|Caenorhabditis elegans Hypothetical
           protein C46H11.10b protein.
          Length = 241

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 429 CSTFYGI*APHHEYSYLTLQTINNNKLLDFISTV-QKIVPYTYS 301
           CS F GI  PH+++S LT   +  N L D +  + +KI    YS
Sbjct: 185 CSQF-GIYCPHNQWSELTDHLVEANALYDNVVNIKEKIGSARYS 227


>U88314-10|AAP68949.1|  344|Caenorhabditis elegans Hypothetical
           protein C46H11.10a protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 429 CSTFYGI*APHHEYSYLTLQTINNNKLLDFISTV-QKIVPYTYS 301
           CS F GI  PH+++S LT   +  N L D +  + +KI    YS
Sbjct: 288 CSQF-GIYCPHNQWSELTDHLVEANALYDNVVNIKEKIGSARYS 330


>AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein42 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 263 SNLFKIFLLLRRIWYNCVLTRFPACWANFTMIISIL 156
           S L +   L R + Y+CV    P  WA++ MIIS L
Sbjct: 60  SLLVQPMYLFRFMTYSCVGIAAPYIWASYLMIISHL 95


>Z29443-11|CAK55173.1|  367|Caenorhabditis elegans Hypothetical
           protein T07C4.11 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 174 GEVCPAGWKPGQDTIIPNPSEKKKYFEK 257
           GE   +GW   +D ++PN    K+Y +K
Sbjct: 32  GEWSTSGWTAVKDWVLPNGQPNKEYLKK 59


>AF040644-2|AAN63399.1|  963|Caenorhabditis elegans Gamma-tubulin
            interacting proteinprotein 1, isoform b protein.
          Length = 963

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -1

Query: 278  FILIFSNLFKIFLLLRRIWYN 216
            F L FS++F +FL+  RI+YN
Sbjct: 942  FFLCFSHIFGLFLVKIRIFYN 962


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,154,613
Number of Sequences: 27780
Number of extensions: 246324
Number of successful extensions: 518
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)