Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314F06f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.005
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 30 0.18
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 30 0.18
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 30 0.24
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 0.32
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 29 0.56
SPAC57A10.14 |sgf11||SAGA complex subunit Sgf11 |Schizosaccharom... 29 0.56
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 28 0.73
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 28 0.73
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 27 1.3
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 27 2.2
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 3.9
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 3.9
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 26 3.9
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 25 6.8
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 25 6.8
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 25 6.8
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 25 6.8
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 25 9.0
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 25 9.0
SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomy... 25 9.0
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.0
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 25 9.0
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 9.0
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 9.0
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 25 9.0
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.5 bits (78), Expect = 0.005
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 455 SYVCPECNKEFVRRSHVTRHM 517
S+VCPEC+K+F R H+ RH+
Sbjct: 422 SFVCPECSKKFKRSEHLRRHI 442
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 419 LKEHIETIH-KRASYVCPECNKEFVRRSHVTRH 514
L+ HI ++H +VC C K F RR ++ +H
Sbjct: 438 LRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH 469
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 30.3 bits (65), Expect = 0.18
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 141 KSCDEDKWESHVEICRISSNIKVRKYHVIYKFCTLTIS**DLHFFSNNIAVKN 299
K E+KWE+ +E+ + S NI Y + YK T+ + L F IA+ N
Sbjct: 528 KETVEEKWENVMELVQQSDNISCIFYELDYKISTIVL----LQNFLTQIALVN 576
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 30.3 bits (65), Expect = 0.18
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 350 NHSTLPNSVACTKSKIWCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 517
+++ P+SV + SK + K+ K YVC C + F R H+ RH+
Sbjct: 35 SNANTPSSVT-SNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHI 89
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.24
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 458 YVCPECNKEFVRRSHVTRHM 517
Y CP C K F R H TRH+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHI 45
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 380 CTKSKIWCPNETVLKEHIETIHKRASYVC--PECNKEFVRRSHVTRH 514
CTK+ ++T HI T +VC P C K F R +TRH
Sbjct: 31 CTKAFYRLEHQT---RHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.5 bits (63), Expect = 0.32
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +2
Query: 401 CPNETVLKEHI---ETIHKRA-SYVCPECNKEFVRRSHVTRHM 517
CP KEH+ E H+ ++ C CN+ F R + RH+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 26.2 bits (55), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 467 PECNKEFVRRSHVTRH 514
P+C K F R+ H+ RH
Sbjct: 31 PDCPKSFTRKEHLRRH 46
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.56
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 413 TVLKEHIETIHKRASYVCPE--CNKEFVRRSHVTRH 514
++L++H+ T +VC C+K F R+SH+ H
Sbjct: 38 SLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
>SPAC57A10.14 |sgf11||SAGA complex subunit Sgf11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 28.7 bits (61), Expect = 0.56
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 120 YVCTMCKKSCDEDKWESHVEICRISSNIKVRKYHVIYK 233
Y C MCK+ ++ +H+E C+ S Y +++
Sbjct: 72 YSCLMCKREIAASRYAAHLEKCKGRSLSNATSYSTLFE 109
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 0.73
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 455 SYVCPECNKEFVRRSHVTRHM 517
SY CP C + F R+ H RH+
Sbjct: 3 SYECPFCKRVFHRQEHQVRHI 23
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 HIETIHKRASYVC--PECNKEFVRRSHVTRHM 517
HI + + C P C K F RR + RH+
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 28.3 bits (60), Expect = 0.73
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 380 CTKSKIWCPNETVLKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 517
CTKS + + H + +++CP C+ F R + RH+
Sbjct: 24 CTKS---FTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 24 KGRPPGSKNKKLKSSNADQS 83
+G P GS+NKK KS N++ S
Sbjct: 84 EGYPSGSRNKKSKSENSEAS 103
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 440 IHKRASYVCPECNKEFVRRSHVTRH 514
I + + C +C K F R ++TRH
Sbjct: 25 IDSKRVFPCDQCAKRFTRHENLTRH 49
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 380 CTKSKIWCPNETVLKEHIETIHKRASYVC--PECNKEFVRRSHVTRHM 517
C + + + L H+ + ++C PEC++ F R + +HM
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 419 LKEHIETIHKRASYVCPECNKEFVRRSHVTRHM 517
++ HI+T Y C C FVR + RH+
Sbjct: 460 VESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Frame = +2
Query: 284 YCCKECGXXXXXXXSYLQHIELNHSTLPNSVACTKSKIWCPNETVLKEHIETIHKRA-SY 460
Y C G +Y +N T C+ K + + H E +H ++
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAF 628
Query: 461 VCPECNKEFVRRSHVTRH 514
C CN+ F R + RH
Sbjct: 629 ACVTCNQRFARMDALNRH 646
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 24 KGRPPGSKNKKLKSSNADQSIDIKQEVN 107
+GRPPG++N K+K ++ S+ + ++
Sbjct: 331 RGRPPGARN-KIKRLRSEPSVSLTLSIS 357
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 382 HKK*NMVSK*NCSEGTHRDNTQKSFVCMPRMQQ 480
+KK V K N GT+RD+ K +V +P ++Q
Sbjct: 58 YKKDGDVKKMNLGAGTYRDDAGKPYV-LPSVRQ 89
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 239 AKFIYNMILTNLNIRTDTTD 180
AKFIYN++L++L D D
Sbjct: 792 AKFIYNLVLSSLENTKDLDD 811
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 6.8
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +3
Query: 135 CKKSCDEDKWESHVEICRI 191
C K C W H CR+
Sbjct: 507 CSKECQHQAWPGHSRWCRV 525
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 434 ETIHKRASYVCPECNKEFVR 493
E I + YVCP+ KEF R
Sbjct: 238 ERIKEECCYVCPDIVKEFSR 257
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 270 FFSNNIAVKNVARSLSSKRAIFST*N*ITPHYL 368
+ + AVK++AR+L+ + A F+ N ++P Y+
Sbjct: 163 YHATKAAVKHLARALAVEWAPFARVNSVSPGYI 195
>SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 206
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 78 QSIDIKQEVNSGRVYV 125
QSI EVN GR+YV
Sbjct: 132 QSIKYNSEVNEGRIYV 147
>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 387
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 472 FWAYIRSSFVYCLYVFLQNSFI-WTPYFTF 386
FW +I S+ + Y FL + FI W F F
Sbjct: 288 FWLWILSALLSSAYTFLWDVFIDWRIRFPF 317
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 60 KSSNADQSIDIKQEVNSGRVYVCTMCKKSCDEDKWESHVEI--CRISSNIKV 209
K SN + S+ IKQ V VY+ + ++ E + I C+ +S KV
Sbjct: 34 KFSNGETSVRIKQSVRGCDVYIVSPASGQVNDHLMELLIMISACKTASAKKV 85
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 389 SKIWCPNETVLKEHI 433
+K WC + VL+EHI
Sbjct: 69 TKDWCDKDVVLREHI 83
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 458 YVCPECNKEF 487
YVCP CNK+F
Sbjct: 136 YVCPFCNKKF 145
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 51 KKLKSSNADQSIDIKQEVNSGRV-YVCTMCKKSCDEDKWESHVEICRISSNIKVRKYHVI 227
+KL S A I ++ E + V Y+ + K++ ++ + E+C +SS + VRK+
Sbjct: 93 EKLASLGAQVVILLRTEPDQFTVDYIMDLRKRTKNQ---LIYTEVCDLSSMLSVRKFATK 149
Query: 228 YKFCT 242
+ CT
Sbjct: 150 WIDCT 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,046,305
Number of Sequences: 5004
Number of extensions: 39128
Number of successful extensions: 156
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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