Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314F01f
         (484 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   3.1  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   5.5  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   5.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.3  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       22   9.6  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    22   9.6  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 233 LLEHYQPHDPQPILQLRHQPWQPSARI 153
           L E  +PH   P  Q+R Q W+  AR+
Sbjct: 346 LPEQLEPHGFGPAYQIRKQQWE-GARV 371


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 30  EDQQALHQRLKGELLPRQVM 89
           ED   LH  LKG+  P Q++
Sbjct: 141 EDAHILHMTLKGQWKPDQIV 160


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 103 RTSWYITWRGSSSPL 59
           R+SWYI   G+ SPL
Sbjct: 87  RSSWYIKQIGNMSPL 101


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 347 EIKQFLECAQQQHDLSLCD 403
           E+++ ++ +++QH L LCD
Sbjct: 320 ELQRAIKASKRQHFLKLCD 338


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 294 LKPTINTRDSRLKDHARGRSSNSWNVLNNSTTCHSVMASMKL 419
           LKP+ +T  S L+ H R +S +S   L    T  S    ++L
Sbjct: 220 LKPSPDTDVSTLETHLRNQSISSVLKLFPDETVRSAYTEVQL 261


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 182 HQPWQPSARIARAAE 138
           H+PW  S  + RAA+
Sbjct: 445 HEPWNASESVQRAAK 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,460
Number of Sequences: 2352
Number of extensions: 7337
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)