Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314E12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical ... 165 1e-41
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr... 29 1.5
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 29 2.0
Z81462-1|CAB03840.1| 125|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81132-13|CAB03427.2| 308|Caenorhabditis elegans Hypothetical p... 27 8.1
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AC091125-2|AAK27887.2| 202|Caenorhabditis elegans Hypothetical
protein Y67D2.5 protein.
Length = 202
Score = 165 bits (402), Expect = 1e-41
Identities = 83/181 (45%), Positives = 123/181 (67%), Gaps = 9/181 (4%)
Frame = +1
Query: 1 KLNSHIKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDE 180
KLNS++KIV ILVPY+ HV YH+WM++EE+++LT SE L+L++EYEMQKTW +DE
Sbjct: 2 KLNSNVKIVAKKCILVPYEPCHVAKYHKWMENEEIRRLTGSEQLSLDEEYEMQKTWRNDE 61
Query: 181 DKCTFIILDKDIFNNTAFDEIDAMIGDTNIFIT--------DKELAIGEIEIMIAEPSAR 336
DK TFI+L+ N + +E+D M+GD N+FI+ ++ GE+E+MIAEP R
Sbjct: 62 DKLTFIVLEM----NESGEEVDHMLGDVNLFISTSPSTENPSDDVITGEVEVMIAEPRGR 117
Query: 337 GKKRGWEAVKLMLLYGIKYIKIQTFEAKISLQNVISIKMF-KKLGFQEKSVSAVFQEVTL 513
GK G EAV++++ + + +KI+ F KI+ N S+ +F KKLGF++ S F+E T
Sbjct: 118 GKGIGEEAVRVIIAWAYENLKIEQFCVKITDDNTPSLSLFKKKLGFKQIGYSTAFKEFTF 177
Query: 514 D 516
+
Sbjct: 178 E 178
>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical
protein K07E3.7a protein.
Length = 1174
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 217 FNNTAFDEID-AMIGDTNIFITDKELAIGEIEIMIAEPSARGKKRGWEAVKLMLLYGIKY 393
F T+ DE + M+ D + T KE+ E ++ +A P+ GK+ + ++ IKY
Sbjct: 69 FQPTSHDECEYVMVEDIHGTQTIKEVFKAESDVGLARPTRSGKQEKVKVMRFFTYRKIKY 128
Query: 394 I 396
I
Sbjct: 129 I 129
>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical
protein K07E3.7b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 217 FNNTAFDEID-AMIGDTNIFITDKELAIGEIEIMIAEPSARGKKRGWEAVKLMLLYGIKY 393
F T+ DE + M+ D + T KE+ E ++ +A P+ GK+ + ++ IKY
Sbjct: 98 FQPTSHDECEYVMVEDIHGTQTIKEVFKAESDVGLARPTRSGKQEKVKVMRFFTYRKIKY 157
Query: 394 I 396
I
Sbjct: 158 I 158
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 LNSHIKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTAS-EP-LNLEQEYEMQKTWHDD 177
++SH++ G I+ P +K + + +++ + + T EP LNL E ++ + W D
Sbjct: 287 IHSHLRPSGRAILSSPRRKQSLQKFLDYVGTVWSDEFTVCIEPDLNLALEQKIGRIWMDG 346
Query: 178 EDK 186
E+K
Sbjct: 347 EEK 349
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 LNSHIKIVGANIILVPYKKHHVPVYHEWMKSEELQKLTAS-EP-LNLEQEYEMQKTWHDD 177
++SH++ G I+ P +K + + +++ + + T EP LNL E ++ + W D
Sbjct: 287 IHSHLRPSGRAILSSPRRKQSLQKFLDYVGTVWSDEFTVCIEPDLNLALEQKIGRIWMDG 346
Query: 178 EDK 186
E+K
Sbjct: 347 EEK 349
>Z81462-1|CAB03840.1| 125|Caenorhabditis elegans Hypothetical
protein C04H5.1 protein.
Length = 125
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 79 HEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDEDKCTFIILDK 210
H +M S L+ +T PLNL + ++K D D T ++LD+
Sbjct: 6 HNFMSSRFLKNVTVGYPLNLVVKQFVEKDIEFDRDN-TIVMLDR 48
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +1
Query: 16 IKIVGANIILVPYKKHHVPVYHEWMK--SEELQKLTASEPLNLEQEYEMQKTWHDDEDKC 189
I I +I+L+ +K + + E +K EE++ T E + L+Q + K W +E K
Sbjct: 378 ILIFYVSIVLIVVRKDIISNFVEKVKYGHEEIKVHTTFENVTLKQAIALNKKWAREEYKD 437
Query: 190 TFIILDKDIFNNTA---FDEIDA--MIGDTNIFITDKEL 291
I + + N A F E D + GD +F+ L
Sbjct: 438 LII---PNCYPNKAEHGFCEFDKSNLTGDLTVFLVGNSL 473
>Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 197 INVHLSSSSCHVFCISYSCSKFNGSEAVSFC 105
+N+ + S C + +Y CSK G+ +FC
Sbjct: 78 LNLMIKPSPCDLLLKTYFCSKIRGTFLFAFC 108
>AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 197 INVHLSSSSCHVFCISYSCSKFNGSEAVSFC 105
+N+ + S C + +Y CSK G+ +FC
Sbjct: 78 LNLMIKPSPCDLLLKTYFCSKIRGTFLFAFC 108
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
protein F36D3.5 protein.
Length = 1152
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 337 GKKRGWEAVKLMLLYGIKYIKIQTFEAKISLQNVISIKMFKKLGFQEKSVSAVFQEV 507
GK R ++ ++ + KI+ N +SIK+ K +G + + S VFQ++
Sbjct: 646 GKLRNGSLTEMSRVFD-EAAKIKGINGDSQSLNTLSIKLQKSVGIDQLAASKVFQKI 701
>Z81132-13|CAB03427.2| 308|Caenorhabditis elegans Hypothetical
protein T26E4.14 protein.
Length = 308
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 278 VMNIFVSPIIASISSKAVLLNISLS-KMINVHLSSSSCHVFC 156
V+N+FVSPI A + K + ++ S K + L+ + C V C
Sbjct: 169 VINLFVSPIYAYVYMKIKKMGLNSSMKAVFKSLTITVCLVLC 210
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 52 YKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDEDKC 189
Y K P+ ++ E L + E+E +KTWHD C
Sbjct: 751 YHKQAQPLMQNKCENSECDHLCLPRAVYREKERVHEKTWHDRPFSC 796
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 52 YKKHHVPVYHEWMKSEELQKLTASEPLNLEQEYEMQKTWHDDEDKC 189
Y K P+ ++ E L + E+E +KTWHD C
Sbjct: 753 YHKQAQPLMQNKCENSECDHLCLPRAVYREKERVHEKTWHDRPFSC 798
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,628,848
Number of Sequences: 27780
Number of extensions: 201525
Number of successful extensions: 670
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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