Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314E10f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499C15 Cluster: myotubularin; n=1; Entamoeba his...    33   5.2  
UniRef50_Q1H1R5 Cluster: Outer membrane efflux protein; n=1; Met...    32   6.9  
UniRef50_Q8IKQ8 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_Q2LCQ5 Cluster: Cox1/2 intron3 ORF; n=1; Dictyostelium ...    32   6.9  

>UniRef50_UPI0000499C15 Cluster: myotubularin; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: myotubularin - Entamoeba
           histolytica HM-1:IMSS
          Length = 601

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -3

Query: 138 KNLLYIFNLYKN*VNNLRYNVTFYFYF*KRKFMILQHRNY 19
           ++ +Y+FN YK  +N++ Y+   Y+    + F + Q+ NY
Sbjct: 209 ESFVYLFNFYKTNINHIGYDQELYYNPNSKYFKVYQNDNY 248


>UniRef50_Q1H1R5 Cluster: Outer membrane efflux protein; n=1;
           Methylobacillus flagellatus KT|Rep: Outer membrane
           efflux protein - Methylobacillus flagellatus (strain KT
           / ATCC 51484 / DSM 6875)
          Length = 493

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -3

Query: 366 TNARALHPNIRLI*QQLISNRKKISYYK*KNYTIDKLLIYNRTRNTPLAWVGDEFNI 196
           + AR LHPN+R    +L + +K +   K   Y   +L++   + N P    G+E+ +
Sbjct: 309 SRARELHPNLRDSAHRLQAAQKSLDLAKKAYYPDMQLILTKHSNNPPYGLAGNEYGV 365


>UniRef50_Q8IKQ8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 747

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -2

Query: 394 QHCHHITQRHERPCIASKYSFNITTINKQSQKNIVL 287
           +HC  I Q H   CI SK S NI   NK S+ N +L
Sbjct: 346 EHC--INQEHYNNCIISKNSNNILGKNKNSENNNIL 379


>UniRef50_Q2LCQ5 Cluster: Cox1/2 intron3 ORF; n=1; Dictyostelium
           citrinum|Rep: Cox1/2 intron3 ORF - Dictyostelium
           citrinum
          Length = 243

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 397 TQHCHHITQRHERPCIAS-KYSFNITTINKQSQKNIVL 287
           T H   I+Q++E+  ++  K  FNITT  K+S+KNI L
Sbjct: 170 TYHSFSISQKYEKVLLSQIKEFFNITTQIKESKKNIFL 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,068,171
Number of Sequences: 1657284
Number of extensions: 7345166
Number of successful extensions: 13739
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13728
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)