Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314E10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AF031477-1|AAC15586.1|  443|Caenorhabditis elegans delta6-fatty-...    28   3.5  
AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical...    27   6.2  
Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical
           protein K08G2.7 protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 132 LLYIFNLYKN*VNNLRYNVTFYFYF*KRKFMILQHRNYSPTI 7
           LL ++  + + + +L Y +  YF+F +  F+IL +  Y P I
Sbjct: 166 LLLVYFAHISNLKHLNYQIDMYFFFGEHIFLILSNSLYVPII 207


>Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical
           protein W08D2.4 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 466 LILRHLITFNEITLNVYPVTSRV 398
           L++ H++TFN  +++ YP  SR+
Sbjct: 330 LLIAHVVTFNHNSVDKYPANSRI 352


>AF031477-1|AAC15586.1|  443|Caenorhabditis elegans
           delta6-fatty-acid-desaturase protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 466 LILRHLITFNEITLNVYPVTSRV 398
           L++ H++TFN  +++ YP  SR+
Sbjct: 330 LLIAHVVTFNHNSVDKYPANSRI 352


>AC024817-27|AAY86296.1|  636|Caenorhabditis elegans Hypothetical
           protein Y54G2A.40 protein.
          Length = 636

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 249 RLKVCRSCNFFTYNTIFFCDCLLIVVILNEYLDAMHGRS 365
           ++  C  C    YN   FC+C ++ V L +Y D +  R+
Sbjct: 366 KVSTCFECYNRLYNECGFCECSIMAVFL-KYKDDVEART 403


>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 454 HLITFNEITLNVYPVTSRVTQHCHHITQRHERPCI 350
           HL+T N+I         R + HC  I +  E P I
Sbjct: 351 HLVTNNQIAFTAESSVGRSSTHCTDIAKAFEYPVI 385


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 454 HLITFNEITLNVYPVTSRVTQHCHHITQRHERPCI 350
           HL+T N+I         R + HC  I +  E P I
Sbjct: 351 HLVTNNQIAFTAESSVGRSSTHCTDIAKAFEYPVI 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,148,554
Number of Sequences: 27780
Number of extensions: 188303
Number of successful extensions: 359
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)