BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS314E09f (413 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23284| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87 SB_1510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6 SB_55318| Best HMM Match : zf-DHHC (HMM E-Value=2.5e-12) 28 3.5 SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5 SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) 27 4.6 SB_40808| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1 SB_12150| Best HMM Match : DUF590 (HMM E-Value=0) 27 6.1 SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1 SB_45083| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1 >SB_23284| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 123 Score = 29.9 bits (64), Expect = 0.87 Identities = 17/79 (21%), Positives = 35/79 (44%) Frame = -2 Query: 298 CKYEICKATFGTQPLELILVFWINL*PKTHSKNKAAYCRYKTT*ERIKWESADKATVAEL 119 C Y + K+TF + +E + F + P T + A + +T+ E I W + + + + Sbjct: 43 CNYHLAKSTFSIRNVEFL--FAVRTLP-TREERITADSKLRTSFETIAWATCESTNASTI 99 Query: 118 YDRSKENIEKVCINYFKLL 62 D + E + +L+ Sbjct: 100 KDEENAHGEDKSFLFIRLI 118 >SB_1510| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 299 Score = 28.3 bits (60), Expect = 2.6 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Frame = -2 Query: 319 NNMQHQMCKYEICKATFGTQP-LELILVFWINL*PKTHSKNKAAYCRYKTT*ERIKWESA 143 N +H+ + K FG P L + L+F ++ K+KA++ Y KW++A Sbjct: 6 NCTKHETTGFAPFKLLFGRSPRLPIDLMFGLD-----SDKDKASHSEYYK-----KWKTA 55 Query: 142 DKATVAELYDRSKENIEKVCINYFKLLRS 56 +++ + ++ ++ CI Y K +RS Sbjct: 56 MGQAYSQVLKTTTQSSQRNCIQYNKRVRS 84 >SB_55318| Best HMM Match : zf-DHHC (HMM E-Value=2.5e-12) Length = 341 Score = 27.9 bits (59), Expect = 3.5 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 Query: 86 YLFYIFLTAVIQFGYCCLVGTFPF 157 Y + L AV+ GY C + FPF Sbjct: 170 YYYSFLLQAVVGLGYACYLAIFPF 193 >SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1459 Score = 27.9 bits (59), Expect = 3.5 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 327 LITTICNTRCANMKSAKPRSALNPWNSFLFSGLTCSRRHTPRTKQLTVD 181 L+ TIC+ A +K K + P ++ TC+R + KQ+T+D Sbjct: 1136 LMCTICSKTFATLKFLKKHVSRKPHEDKPYNSTTCNRAY---RKQITLD 1181 >SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) Length = 1691 Score = 27.5 bits (58), Expect = 4.6 Identities = 24/80 (30%), Positives = 34/80 (42%) Frame = -3 Query: 240 FSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ*PNCMTAVRKI*KRYASIILSFL 61 FSG T S+ H P+ VD K+ K + C T +KI +Y S + F Sbjct: 958 FSGKTTSKCHLPKPSDCFVDTLETKQIYEAKDDSYP----CRTGKKKI-DKYPSSHIKFS 1012 Query: 60 GVFVVYS*YNFGITAVSEDI 1 G + +F I+ EDI Sbjct: 1013 GHLSKPAPSSFDISVKLEDI 1032 >SB_40808| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 27.1 bits (57), Expect = 6.1 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 273 RSALNPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKE 160 R+ L W LF L CSR K++ + KP+ K+ Sbjct: 3 RAVLACWPLVLFLALFCSRARAENDKRIYTNKKPVYKK 40 >SB_12150| Best HMM Match : DUF590 (HMM E-Value=0) Length = 393 Score = 27.1 bits (57), Expect = 6.1 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +2 Query: 89 LFYIFLTAVIQFGYCCL-VGTFPFNSFLS 172 LFY +L VIQFG+ + V FP F + Sbjct: 142 LFYEYLEMVIQFGFITIFVTAFPLGPFFA 170 >SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 268 Score = 26.6 bits (56), Expect = 8.1 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -2 Query: 163 RIKWESADKATVAELYDRSKENIEKV 86 R+KW+ +K + Y +ENIE++ Sbjct: 222 RMKWKKDEKQKTEDCYSAHQENIEEI 247 >SB_45083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 117 Score = 26.6 bits (56), Expect = 8.1 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -3 Query: 336 PMKLITTICNTRCANMKSAKPRSALN 259 P K+ +C RC ++AKP LN Sbjct: 74 PFKIEDYLCGDRCETFETAKPAKNLN 99 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,405,530 Number of Sequences: 59808 Number of extensions: 221789 Number of successful extensions: 511 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 510 length of database: 16,821,457 effective HSP length: 75 effective length of database: 12,335,857 effective search space used: 764823134 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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