Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314E08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0965 + 21915842-21916906                                         29   1.7  
09_04_0198 + 15528576-15528645,15528746-15528893,15529182-155293...    29   1.7  
03_05_0894 + 28571015-28571391,28571651-28571768,28572069-285723...    29   2.3  
11_08_0098 - 28334865-28336114,28336228-28336357                       29   3.0  
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672     29   3.0  
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090...    29   3.0  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    28   5.2  
12_01_0451 + 3565046-3565257,3565427-3565604                           27   6.9  

>10_08_0965 + 21915842-21916906
          Length = 354

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 181 ATSSCPVCRRGLLYPH--FPSVLQMKLCKKSTR 273
           A  SCP+CR  +  PH   P +L+++L   S+R
Sbjct: 163 ANPSCPLCRASIALPHPPLPDLLRVELGSVSSR 195


>09_04_0198 +
           15528576-15528645,15528746-15528893,15529182-15529377,
           15529512-15529604,15530403-15530462,15530563-15530637,
           15531072-15531152,15531262-15531603,15531967-15531999
          Length = 365

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 497 VDSGCRGDRIVKRQNFDPTNTSFLHVHLE 411
           +D+GC  D    RQ+ DP+ +   H+HLE
Sbjct: 290 IDNGCSNDE--DRQSVDPSTSVVYHLHLE 316


>03_05_0894 +
           28571015-28571391,28571651-28571768,28572069-28572376,
           28572452-28572583,28572672-28572770,28572950-28573487
          Length = 523

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/90 (20%), Positives = 38/90 (42%)
 Frame = -1

Query: 278 CNLVDFLQSFICSTEGKCGYKSPRRQTGHDEVAVRFIIDPDR*VVGEFVQ*PFEVRAGGF 99
           CN ++F ++  C    KCG+K P+     D +  +  +D ++     F+Q   + R    
Sbjct: 346 CNYLNFKRNAFCL---KCGWKRPKSLNNQDSIESQRDLDDNKHSAISFIQDGIQSRRQIL 402

Query: 98  QVTLAVDPGSKE*NTNETDETSHPESGLVP 9
           Q    +     +  ++E +   H +  + P
Sbjct: 403 QNKAPLSDEDSDFWSSEEEGAYHSDKNIPP 432


>11_08_0098 - 28334865-28336114,28336228-28336357
          Length = 459

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +1

Query: 295 NASITKYSSFSGIRRKLPSGR--WRKAQLCSLTRG*SCKKNSRWTCR 429
           N+S++  SSFSGI      GR   R+A    L R  S + +S  +CR
Sbjct: 373 NSSVSARSSFSGIGSSFNGGRLGMRRADEVLLERNFSARYSSSSSCR 419


>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
          Length = 641

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 103 PPARTSKGHCTNSPTT*RSGSIMKRTATSSCPVCRRGL 216
           PPA+T    CT+         I+K +++S CP+CRR L
Sbjct: 401 PPAKTVITSCTHIYCQTCIMKILK-SSSSRCPICRRSL 437


>02_05_0916 -
           32706039-32706332,32707483-32708103,32708450-32709070,
           32709183-32709752,32709840-32709918,32710002-32710075,
           32711336-32711398
          Length = 773

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 231 SFGATDETLQEIYQVARLHPHKCFNNKIFKLLRDQKETAVGTLEKSSALFVDE 389
           S G ++  +Q++ Q A LH  K    K    +R+  +T + ++EKS   + D+
Sbjct: 549 SGGLSEAEIQKMVQEAELHSQKDQERKALIDIRNNADTTIYSVEKSLGEYRDK 601


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 33  TRFISLISILLLTPGIYGQCNLKTAGAYFKRSLYEFSNDLAVR 161
           T FIS + +  L   +Y   N+  A +YF R  Y   ND+  R
Sbjct: 191 TPFISTLDLRPLQDTMYPFVNVSVAVSYFSRQRYGQVNDVITR 233


>12_01_0451 + 3565046-3565257,3565427-3565604
          Length = 129

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +2

Query: 275 CKAAPS*MLQ*QNIQASPGSEGNCRRDAGEKLSFVR*REDDRARKIPGGRAEN 433
           C+  P   L     +  PG  G  RR  GE+L  V  R  D    + GG  E+
Sbjct: 62  CRKHPGGELLFTRRRHQPGQRGGGRRHGGERLGGVLRRRHDGDGAVRGGVVES 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,475,731
Number of Sequences: 37544
Number of extensions: 300098
Number of successful extensions: 851
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)