Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314E06f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 82 3e-16
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 75 4e-14
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 72 3e-13
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 62 2e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 60 7e-10
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 59 2e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 56 1e-08
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 56 1e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 6e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 54 6e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 54 8e-08
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 54 8e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 54 8e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 52 2e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 52 2e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 52 2e-07
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 52 2e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 52 2e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 52 3e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 52 3e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 51 4e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 51 4e-07
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 51 4e-07
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 51 4e-07
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 50 1e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 49 2e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 49 2e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 49 2e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 48 3e-06
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 48 3e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 47 7e-06
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 47 7e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 47 7e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 47 7e-06
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 46 2e-05
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 46 2e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 46 2e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 46 2e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 45 3e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 4e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 45 4e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 6e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 6e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 43 1e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 43 1e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 43 1e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 43 1e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 43 1e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 43 1e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 42 2e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 42 2e-04
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 42 3e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 42 3e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 42 3e-04
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 42 3e-04
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 42 3e-04
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 42 3e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 42 3e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 42 3e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 42 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 41 4e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 6e-04
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 40 8e-04
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 40 8e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 40 8e-04
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 38 0.003
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.003
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 38 0.004
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 38 0.004
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 38 0.005
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 38 0.005
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 38 0.005
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 38 0.005
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 38 0.005
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 38 0.005
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 37 0.007
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 37 0.007
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.007
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 37 0.007
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 37 0.009
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 36 0.012
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 36 0.012
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.012
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 36 0.012
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 36 0.012
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 36 0.012
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 36 0.017
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.017
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 36 0.022
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 36 0.022
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.022
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 36 0.022
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 36 0.022
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 35 0.029
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 35 0.029
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 35 0.029
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 35 0.029
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 35 0.029
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 35 0.029
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 35 0.029
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 35 0.029
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 35 0.038
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 35 0.038
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 34 0.050
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 34 0.050
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.050
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 34 0.050
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 34 0.050
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 34 0.050
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 34 0.050
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 34 0.050
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 34 0.050
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.050
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 34 0.050
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 34 0.050
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 34 0.050
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.067
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 34 0.067
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 34 0.067
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 34 0.067
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 34 0.067
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 33 0.088
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 33 0.088
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.12
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.12
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.12
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 33 0.12
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.12
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 33 0.12
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.15
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 33 0.15
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 32 0.20
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 32 0.20
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 32 0.20
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.20
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 32 0.20
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 32 0.20
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 32 0.27
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 32 0.27
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.27
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 32 0.27
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.27
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 32 0.27
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 32 0.27
At1g30750.1 68414.m03758 expressed protein 32 0.27
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 0.36
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.36
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 31 0.36
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 31 0.36
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 31 0.36
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 31 0.36
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 31 0.36
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 31 0.36
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 31 0.47
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 31 0.47
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 0.47
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 31 0.47
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.47
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.47
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 31 0.62
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 31 0.62
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 31 0.62
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 0.62
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 30 0.82
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 30 0.82
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 30 0.82
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 30 0.82
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 30 0.82
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 30 0.82
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 30 0.82
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 30 0.82
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 30 0.82
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 30 1.1
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 30 1.1
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.1
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 30 1.1
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 30 1.1
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 29 1.4
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 29 1.4
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 1.4
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 1.4
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 29 1.4
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 29 1.9
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 29 1.9
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 29 1.9
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 1.9
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 27 2.4
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 2.5
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 29 2.5
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 29 2.5
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 3.3
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 3.3
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 3.3
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 28 3.3
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 28 3.3
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 28 4.4
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 28 4.4
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 27 5.8
At1g59453.1 68414.m06679 transcription factor-related weak simil... 27 5.8
At1g59077.1 68414.m06670 hypothetical protein 27 5.8
At1g58766.1 68414.m06659 hypothetical protein 27 5.8
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 27 5.8
At5g51270.1 68418.m06356 protein kinase family protein contains ... 27 7.7
At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low sim... 27 7.7
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 27 7.7
At3g55980.1 68416.m06220 zinc finger (CCCH-type) family protein ... 27 7.7
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 27 7.7
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 27 7.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 7.7
At1g32760.1 68414.m04039 glutaredoxin family protein contains Pf... 27 7.7
At1g12130.1 68414.m01405 flavin-containing monooxygenase family ... 27 7.7
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 81.8 bits (193), Expect = 3e-16
Identities = 46/106 (43%), Positives = 58/106 (54%)
Frame = +1
Query: 181 GPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSAD 360
G S ++ NS + N + KP LK TL GHT A+S VKFS +G LAS+S D
Sbjct: 7 GTSNGVANANSTGNAGTSGNVP-IYKPYRHLK-TLEGHTAAISCVKFSNDGNLLASASVD 64
Query: 361 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
K + +W A + GH GISD+AWSSDS SASDD +
Sbjct: 65 KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLR 110
Score = 60.1 bits (139), Expect = 9e-10
Identities = 33/82 (40%), Positives = 42/82 (51%)
Frame = +1
Query: 253 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
A+ Y L GHT V V F+P + S S D+ I+IW GK + I H M I
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPI 173
Query: 433 SDVAWSSDSRLIVSASDDXNFK 498
S V ++ D LIVSAS D + K
Sbjct: 174 SSVHFNRDGSLIVSASHDGSCK 195
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Frame = +1
Query: 169 QTHGGPSASL--SGPNSLSQSAPQSNKSSV--AKPNYTLKFTLAGHTKAVSSVKFSPNGE 336
+ H P +S+ + SL SA + AK LK + + AVS KFSPNG+
Sbjct: 167 KAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGK 226
Query: 337 WLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWS-SDSRLIVSASDD 486
++ ++ D +K+ GKF K +GH K+ A+S ++ + IVS S+D
Sbjct: 227 FILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSED 279
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISD 438
NY+L GH+ +S + +S + + S+S D ++IW A + K + GH +
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 439 VAWSSDSRLIVSASDDXNFK 498
V ++ S LIVS S D +
Sbjct: 134 VNFNPPSNLIVSGSFDETIR 153
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM-GISDVAWSSDS 459
+ H+ +SSV F+ +G + S+S D KIW A +G KT+ K +S +S +
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNG 225
Query: 460 RLIVSASDDXNFK 498
+ I+ A+ D K
Sbjct: 226 KFILVATLDSTLK 238
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +1
Query: 244 SSVAKPNY-TLKF--TLAGHTKAVSSVK--FS-PNGEWLASSSADKLIKIWGAYDGKFEK 405
S++ NY T KF GHT V + FS NG+++ S S D + +W +
Sbjct: 235 STLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ 294
Query: 406 TISGHKMGISDVA 444
+ GH + V+
Sbjct: 295 RLEGHTDAVISVS 307
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 74.5 bits (175), Expect = 4e-14
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +1
Query: 274 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 453
K L GH + V+ V FSP+G+W+AS+S DK +++W G+F GH + V+WS+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 454 DSRLIVSASDDXNFK 498
DSRL++S S D K
Sbjct: 413 DSRLLLSGSKDSTLK 427
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T+AGH +AV V FSP+G+ LAS S D +++W Y T GHK + VAWS D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 460 RLIVSAS 480
+ +VS S
Sbjct: 164 KHLVSGS 170
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH V V +S + L S S D +KIW K ++ + GH + V WS D +
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 469 VSASDDXNFK 498
VS D K
Sbjct: 460 VSGGKDRVLK 469
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAW-- 447
FT GH V +V +SP+G+ L S S I W G+ E ++GHK I+ ++W
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Query: 448 ---SSDSRLIVSASDD 486
SS R V++S D
Sbjct: 205 VHLSSPCRRFVTSSKD 220
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L+GHT AV+ VK+ +G + + S D IK+W GK + + GH I+ +A S++
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYV 295
Query: 463 LIVSASD 483
L A D
Sbjct: 296 LRTGAFD 302
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
LK L GH V +V +SP+GE + S D+++K+W
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNG-----EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 447
L GH K ++ + + P +SS D +IW K +SGH + ++ V W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 448 SSDSRLIVSASDDXNFK 498
D +I + S D K
Sbjct: 250 GGDG-IIYTGSQDCTIK 265
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 71.7 bits (168), Expect = 3e-13
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI---SGHKMG 429
Y TL H +AVSSVKFS +G LAS+SADK I+ + + + + +GH+ G
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 430 ISDVAWSSDSRLIVSASDDXNFK 498
ISDVA+SSD+R IVSASDD K
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLK 96
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT V F+P + S S D+ ++IW GK K + H ++ V ++ D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 460 RLIVSASDD 486
LIVS+S D
Sbjct: 168 SLIVSSSYD 176
Score = 50.0 bits (114), Expect = 9e-07
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = +1
Query: 190 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLI 369
AS S ++ + +A+P +FT GH +S V FS + ++ S+S DK +
Sbjct: 40 ASASADKTIRTYTINTINDPIAEP--VQEFT--GHENGISDVAFSSDARFIVSASDDKTL 95
Query: 370 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K+W G KT+ GH V ++ S +IVS S D
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH---KMGIS 435
+ +K + VS V+FSPNG+++ + D +++W KF KT +GH + IS
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 436 DVAWSSDSRLIVSASDD 486
++ + IVS S+D
Sbjct: 248 SAFSVTNGKRIVSGSED 264
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVAWSSDS 459
L H+ V++V F+ +G + SSS D L +IW + G KT I +S V +S +
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 460 RLIVSASDDXNFK 498
+ I+ + D +
Sbjct: 211 KFILVGTLDNTLR 223
Score = 35.5 bits (78), Expect = 0.022
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 280 TLAGHTKA---VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
T GH A +SS NG+ + S S D + +W K + + GH + +VA
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACH 294
Query: 451 SDSRLIVSASDD 486
LI S S D
Sbjct: 295 PTENLIASGSLD 306
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GHT+ V +V P +AS S DK ++IW
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 403 KTISGHKMGISDVAWSSDSRLIVSASDDXNFKS 501
+T++ H +S V +SSD RL+ SAS D ++
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRT 50
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +1
Query: 205 PNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
P+S SQ + K+ + + L+GH AV ++KF+P G +AS S D+ I +W
Sbjct: 24 PHSASQGPGPNGKNRTSSLEAPIML-LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV 82
Query: 385 Y-DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFKS 501
+ D K + GHK I D+ W+SD IVSAS D ++
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRA 122
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA-WSSDS 459
L GH A+ + ++ +G + S+S DK ++ W GK K ++ H ++
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 460 RLIVSASDDXNFK 498
LI+S SDD K
Sbjct: 152 PLIISGSDDGTAK 164
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KMGIS 435
TL GH ++ + SP+G +L ++ D + +W A + K GH + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 436 DVAWSSDSRLIVSASDD 486
+WS D + + S D
Sbjct: 277 KCSWSPDGTKVTAGSSD 293
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
K + +SP+G + + S+D+++ IW + + GH +++ + +I S
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSC 332
Query: 478 SDDXN 492
S D N
Sbjct: 333 SSDKN 337
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD-SRLIVSAS 480
+++V FS + + + D +K+W G+ T+ GH+ I+ ++ S D S L+ +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 481 DD 486
D+
Sbjct: 243 DN 244
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 60.5 bits (140), Expect = 7e-10
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH + V S+ FSPNGE++AS S DK I IW +GK KT +G+ GI +V W+ + I
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNG-GIFEVCWNKEGNKI 597
Query: 469 VSASDD 486
+ D
Sbjct: 598 AACFAD 603
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 175 HGGPSASLSGPNSLSQSAPQSNKSS-VAKPNYTLKF-TLAGHTKAVSSVKFSPNGEWLAS 348
H GP+ + N++S + ++ + K T T GH V+ VK+ P G LAS
Sbjct: 406 HSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLAS 465
Query: 349 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
S D KIW F + H I + WS
Sbjct: 466 CSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWS 499
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +1
Query: 268 TLKFTLAGHTKAVSSVKFSPNGEW---------LASSSADKLIKIWGAYDGKFEKTISGH 420
T L HTK + ++++SP G LAS+S D +K+W A GK + +GH
Sbjct: 481 TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH 540
Query: 421 KMGISDVAWSSDSRLIVSASDD 486
+ + +A+S + I S S D
Sbjct: 541 REPVYSLAFSPNGEYIASGSLD 562
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 229 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 408
P S S + PN ++ L GHT V + +SP+ LAS S D +IW +G F+
Sbjct: 246 PTSQTSHI--PNSDVRI-LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAV 302
Query: 409 ISGHKM 426
+G +
Sbjct: 303 HTGRNI 308
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/95 (21%), Positives = 44/95 (46%)
Frame = +1
Query: 199 SGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+G +L + ++ + N L TL+ H + S+K++ G++L + S D+ +W
Sbjct: 333 NGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVW 392
Query: 379 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
++++ H DV W ++ S++D
Sbjct: 393 DVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD 427
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 328 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
N A+SS D +I + + + KT +GH+ ++ V W L+ S SDD K
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAK 473
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 59.3 bits (137), Expect = 2e-09
Identities = 43/115 (37%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +1
Query: 172 THGGPSASLSGPNSLSQSAPQSNKSSVAKP--NYTLKFTLAG-HTKAVSSVKFSPNGEWL 342
T G +SG NS S + +N SV N LK ++ G H + ++SPNGEW+
Sbjct: 13 TERGRGILISG-NSKSDTILYTNGRSVVTLDLNNPLKVSIYGEHAYPATVARYSPNGEWI 71
Query: 343 ASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAWSSDSRLIVSASDDXNFKSL 504
AS ++IWGAY+ K G I D+ WS+D IV AS D KSL
Sbjct: 72 ASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIV-ASGDGKGKSL 125
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGH 420
P + K + H+ V+ V+F+P+G + S+DK I YDGK + + GH
Sbjct: 175 PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGII---YDGKTCEILGELSSDDGH 231
Query: 421 KMGISDVAWSSDSRLIVSASDDXNFK 498
K I V+WS D + +++ S D + K
Sbjct: 232 KGSIYAVSWSPDGKQVLTVSADKSAK 257
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 247 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHK 423
S+ + T + L H A+S +++SP+ AS+ ++ +W + + K + H
Sbjct: 475 SINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHS 534
Query: 424 MGISDVAWSSDSRLIVSASDD 486
I+ +AWS +S ++ + S D
Sbjct: 535 ARINCLAWSPNSTMVATGSLD 555
Score = 36.3 bits (80), Expect = 0.012
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTIS--GHKMGISDV---- 441
GH ++ +V +SP+G+ + + SADK KIW D G T++ G G+ D+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 442 AWSSDSRLIVS 474
W +D + VS
Sbjct: 290 LWQNDHIVTVS 300
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 463 LIVSASDDXNFK 498
+ SA DD K
Sbjct: 226 YMFSAGDDKQVK 237
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
LK TL GH V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 451 SDSRLIVSASDD 486
++++ D
Sbjct: 264 PTLDVVLTGGRD 275
Score = 34.7 bits (76), Expect = 0.038
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V SV P + + S D IK W GK TI+ HK + +A V
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 472 SASDD 486
SAS D
Sbjct: 354 SASAD 358
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 463 LIVSASDDXNFK 498
+ SA DD K
Sbjct: 232 YMFSAGDDKQVK 243
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
F L+GH V SV P + + S D IK W GK T++ HK + +
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPK 355
Query: 457 SRLIVSASDDXNFK 498
SAS D K
Sbjct: 356 ENAFASASADNTKK 369
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGV 263
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 6e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 463 LIVSASDD 486
+V+AS D
Sbjct: 273 YLVTASSD 280
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 423
+ L+ L GH + V FS +GE+L ++S+D ++W GK E H+
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIW 378
HTK V +V F G + S S D +KIW
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIW 111
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH S+V+F P GE+LAS S+D +KIW +T GH GIS + ++ D R +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 469 VSASDD 486
VS D
Sbjct: 158 VSGGLD 163
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +1
Query: 238 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
N ++ KP T +L GHT AV SV F + + ++ +IK+W + K + +G
Sbjct: 41 NLWAIGKP--TSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG 98
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H+ S V + + S S D N K
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLK 125
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GH++ +S+++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 137 TYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE 196
Query: 460 RLIVSASDDXNFK 498
L+ + S D K
Sbjct: 197 FLLATGSADRTVK 209
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H + S+ F P LA+ SAD+ +K W + + G+ + + D R +
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242
Query: 472 SASDD 486
DD
Sbjct: 243 CGLDD 247
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 53.6 bits (123), Expect = 8e-08
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +1
Query: 187 SASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 363
S +++ +SL + + +S+ + P+ TL GH + + SV+FS + + ++S DK
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDK 563
Query: 364 LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
+KIW DG KT GH + ++ +D VS D K
Sbjct: 564 TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLK 608
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 441
N + +A H K ++SV + N + + S D+ IW D T+ GHK I V
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 442 AWSSDSRLIVSASDDXNFK 498
+S+ + +++AS D K
Sbjct: 548 EFSTVDQCVMTASGDKTVK 566
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS--R 462
GH V + +G LA++ AD+ + +W G GHK +S + + DS
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKN 159
Query: 463 LIVSASDD 486
+++S SDD
Sbjct: 160 ILISGSDD 167
Score = 35.9 bits (79), Expect = 0.017
Identities = 23/106 (21%), Positives = 49/106 (46%)
Frame = +1
Query: 169 QTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLAS 348
Q +GG +S S A + V + ++K T+ G + ++++ SP+ + L S
Sbjct: 18 QFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFS 77
Query: 349 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
+ + I++W K ++ GH+ + +A + L+ +A D
Sbjct: 78 AGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGAD 123
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GHT +V F +G S AD L+K+W + T H+ + +A +
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKT 637
Query: 460 RLIVSASDD 486
+I + D
Sbjct: 638 EMIATGGGD 646
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 426
H AV+S+ S +G L S+ DK++ +W +D + T++ +++
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEV 235
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 277 FTLAGHTKAVSSVK--FSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 447
+ LAGH + V S+ S +G L + S DK +++W A +GH I VA+
Sbjct: 395 YVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAF 454
Query: 448 SSDS-RLIVSASDDXNFK 498
+ S VS S D K
Sbjct: 455 AKKSFSFFVSGSGDRTLK 472
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 463 LIVSASDD 486
+V+AS D
Sbjct: 267 FLVTASSD 274
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 420
+ L+ L GH + V FS +GE+L ++S+D ++W GK K GH
Sbjct: 243 FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T HT V +V F + +W+ S S D +KIW
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIW 105
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH S+V+F P GE+LAS S+D +++W +T GH GIS + +S D R +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 469 VSASDD 486
VS D
Sbjct: 107 VSGGLD 112
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GHT+ +S+++FSP+G W+ S D ++K+W GK H+ I + +
Sbjct: 86 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE 145
Query: 460 RLIVSASDDXNFK 498
L+ + S D K
Sbjct: 146 FLLATGSADRTVK 158
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
+L GHT V SV F+ + + ++ +IK+W + K + +GH+ S V +
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 460 RLIVSASDDXNFK 498
+ S S D N +
Sbjct: 62 EFLASGSSDTNLR 74
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H + S+ F P LA+ SAD+ +K W + T G+ +A+ D + +
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 191
Query: 472 SASDD 486
DD
Sbjct: 192 CGLDD 196
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/103 (31%), Positives = 52/103 (50%)
Frame = +1
Query: 178 GGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA 357
GG P+ LS + S++ + +K L GH AV F +G ++ + S
Sbjct: 267 GGFRKHHRAPSILSACHAIAKPSTMVQKMQNIK-KLRGHRNAVYCAIFDRSGRYVITGSD 325
Query: 358 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
D+L+KIW + GH+ I+D+A SS++ L+ SAS+D
Sbjct: 326 DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASND 368
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS---SDS 459
GH ++ + S N +AS+S D +I++W DG + GH ++ +A+S +
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 460 RLIVSASDD 486
++S+SDD
Sbjct: 405 YQLLSSSDD 413
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGA 384
L GHT AV+++ FSP L SSS D +IW A
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDA 421
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 189 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 248
Query: 460 RLIVSASDD 486
R IVS +D
Sbjct: 249 RWIVSGGED 257
Score = 50.8 bits (116), Expect = 5e-07
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 460 RLIVSASDDXNFK 498
L+ + S D K
Sbjct: 291 FLLATGSADKTVK 303
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +1
Query: 238 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 135 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG 192
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H+ V + S S D N K
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLK 219
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIW 378
H + S+ F P+ LA+ SADK +K W
Sbjct: 277 HEGKIQSLDFHPHEFLLATGSADKTVKFW 305
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/75 (34%), Positives = 33/75 (44%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 441
N+ TL GHT V + +SP+ LAS S D + IW G + GH + V
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 442 AWSSDSRLIVSASDD 486
W I S SDD
Sbjct: 167 TWDPIGSFIASQSDD 181
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 420
L GH V V + P G ++AS S DK + IW D GH
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFE--KTISGHKMGISDVAWSSDSRLIV 471
+ S+ PNGE A+ D + K D K T+ H ++ V W+ +SR +
Sbjct: 16 IFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVA 75
Query: 472 SASDD 486
S SDD
Sbjct: 76 SGSDD 80
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 463 LIVSASDDXNFKSLGT 510
IVSAS D K T
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 274 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 438
K+T++ GH + VS V+FSPN + S+S DK +K+W + K ++ GH ++
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNT 198
Query: 439 VAWSSDSRLIVSASDD 486
VA S D L S D
Sbjct: 199 VAVSPDGSLCASGGKD 214
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
N L+ +L GH+ +++V SP+G AS D +I +W +GK
Sbjct: 182 NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 432
LK + HT V+++ N + + ++S DK I +W G ++ ++GH +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 433 SDVAWSSDSRLIVSASDDXNFK 498
DV SSD + +S S D +
Sbjct: 67 EDVVLSSDGQFALSGSWDGELR 88
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +1
Query: 193 SLSGPNSLSQSAPQSNK--SSVAKPNYTLKFTLAGHTKAVSSVKFSPNG--EWLASSSAD 360
SL +S S ++ K +++ + YT+ GH VS V+FSPN + S+S D
Sbjct: 114 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 361 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K +K+W + K T++GH +S VA S D L S D
Sbjct: 174 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/76 (35%), Positives = 38/76 (50%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L GH+ V V S +G++ S S D +++W G + GH + VA+S D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 463 LIVSASDDXNFKSLGT 510
IVSAS D K T
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 205 PNSLSQSAPQSNKSSVAK----PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK 372
PN+L + ++ K N L+ TLAGHT VS+V SP+G AS D ++
Sbjct: 160 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 219
Query: 373 IWGAYDGK 396
+W +GK
Sbjct: 220 LWDLAEGK 227
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKMG 429
LK T+ HT V+++ N + + S+S DK I +W AY G ++ ++GH
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-GVAQRRLTGHSHF 65
Query: 430 ISDVAWSSDSRLIVSASDDXNFK 498
+ DV SSD + +S S D +
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELR 88
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLI 468
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + +
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 608
Query: 469 VSASDDXN 492
+ + D N
Sbjct: 609 LCSCDSNN 616
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 423
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 673 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 718
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S D K
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 634 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 693
Query: 478 SDD 486
S+D
Sbjct: 694 SED 696
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 752 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDX 489
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS D
Sbjct: 721 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 779
Query: 490 NFK 498
+ K
Sbjct: 780 SVK 782
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 205 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 369
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 560 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 618
Query: 370 KIW 378
+ W
Sbjct: 619 RFW 621
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLI 468
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 469 VSASDDXN 492
+ + D N
Sbjct: 611 LCSCDSNN 618
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 423
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S D K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 478 SDD 486
S+D
Sbjct: 696 SED 698
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDX 489
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS D
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 490 NFK 498
+ K
Sbjct: 782 SVK 784
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 205 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 369
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 370 KIW 378
+ W
Sbjct: 621 RFW 623
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLI 468
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 469 VSASDDXN 492
+ + D N
Sbjct: 611 LCSCDSNN 618
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 423
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S D K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 478 SDD 486
S+D
Sbjct: 696 SED 698
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDX 489
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS D
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 490 NFK 498
+ K
Sbjct: 782 SVK 784
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 205 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 369
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 370 KIW 378
+ W
Sbjct: 621 RFW 623
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLI 468
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 469 VSASDDXN 492
+ + D N
Sbjct: 611 LCSCDSNN 618
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 423
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S D K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 478 SDD 486
S+D
Sbjct: 696 SED 698
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDX 489
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS D
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 490 NFK 498
+ K
Sbjct: 782 SVK 784
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 205 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 369
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 370 KIW 378
+ W
Sbjct: 621 RFW 623
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 51.6 bits (118), Expect = 3e-07
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLI 468
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 469 VSASDDXN 492
+ + D N
Sbjct: 611 LCSCDSNN 618
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 423
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S D K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 478 SDD 486
S+D
Sbjct: 696 SED 698
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.5 bits (73), Expect = 0.088
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDX 489
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS D
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 490 NFK 498
+ K
Sbjct: 782 SVK 784
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 205 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 369
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 370 KIW 378
+ W
Sbjct: 621 RFW 623
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 460 RLIVSASDD 486
R +VS +D
Sbjct: 156 RWVVSGGED 164
Score = 50.8 bits (116), Expect = 5e-07
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 460 RLIVSASDDXNFK 498
L+ + S D K
Sbjct: 198 FLLATGSADRTVK 210
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +1
Query: 238 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H+ V + S S D N K
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLK 126
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIW 378
H + S+ F P+ LA+ SAD+ +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 460 RLIVSASDD 486
R +VS +D
Sbjct: 156 RWVVSGGED 164
Score = 50.8 bits (116), Expect = 5e-07
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 460 RLIVSASDDXNFK 498
L+ + S D K
Sbjct: 198 FLLATGSADRTVK 210
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +1
Query: 238 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H+ V + S S D N K
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLK 126
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIW 378
H + S+ F P+ LA+ SAD+ +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTI 411
+SS+++ ++T K L HT+ V S +SP+G+ LA++S D IW Y +FE T+
Sbjct: 56 QSSLSR-SWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL 114
Query: 412 SGHKMGISDVAWSSDSRLIVSASDD 486
GH+ + V+W++ + + S D
Sbjct: 115 EGHENEVKSVSWNASGSCLATCSRD 139
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKMGISDVAWS 450
TL GH V SV ++ +G LA+ S DK + IW +G ++GH + V W
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 451 SDSRLIVSASDDXNFK 498
++ S S D K
Sbjct: 173 PTMDVLFSCSYDNTIK 188
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFE------KTISGH 420
Y L GHT+ V V++ P + L S S D IK+W + DG+++ ++ +GH
Sbjct: 153 YDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGH 212
Query: 421 KMGISDVAWSSDSRLIVSASDDXNFKSLGT 510
+ +++++ +V+ SDD K GT
Sbjct: 213 SSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
Score = 35.1 bits (77), Expect = 0.029
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 160 AAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTL-AGHTKAVSSVKFSPN-- 330
+AH + AS +G N++ S SV P+Y L H V+SV++SP
Sbjct: 272 SAHWSRDDIIASGAGDNAIRLFV-DSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEG 330
Query: 331 GEWLASSSADKLIKIW 378
LAS+S D ++KIW
Sbjct: 331 NRLLASASDDGMVKIW 346
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-----------TISG-HKMGI 432
GH+ V S+ F+ G+ + + S D +KIWG K + T+SG H I
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTI 270
Query: 433 SDVAWSSDSRLIVSASDD 486
WS D + A D+
Sbjct: 271 YSAHWSRDDIIASGAGDN 288
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 463 LIVSASDDXNFKSLGT 510
IVSAS D K T
Sbjct: 119 QIVSASRDRTIKLWNT 134
Score = 50.0 bits (114), Expect = 9e-07
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +1
Query: 274 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 438
K+T++ GH + VS V+FSPN + S+S DK +K+W + K T++GH ++
Sbjct: 139 KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNT 198
Query: 439 VAWSSDSRLIVSASDD 486
VA S D L S D
Sbjct: 199 VAVSPDGSLCASGGKD 214
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
N L+ TLAGH+ +++V SP+G AS D +I +W +GK
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 432
LK T+ HT V+++ N + + +SS DK I +W G ++ ++GH +
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 433 SDVAWSSDSRLIVSASDDXNFK 498
DV SSD + +S S D +
Sbjct: 67 QDVVLSSDGQFALSGSWDGELR 88
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKF--EKTISGHKM 426
+P+ + TL GH+K V+S+KF + + + ++S+DK ++IWG + DG + T+ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSA 310
Query: 427 GISDVAWSSDSRLIVSASDD 486
+ V + ++ VSAS D
Sbjct: 311 EVRAVTVHATNKYFVSASLD 330
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 307 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
++ F P+G L + +A ++KIW GH I+ +++S + + +A+ D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 235 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 396
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 397 FEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K++S H+ + D+ WS D ++S S D
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 107 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 166
Query: 460 RLIVSASDD 486
+ + S S D
Sbjct: 167 KYVASLSSD 175
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKMGISDVAWS 450
K V +V F P LA++ AD IK+W G+ EK +++ H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 451 SDSRLIVSASD 483
L+ S +D
Sbjct: 74 PSGELLASGAD 84
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 235 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 396
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 397 FEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K++S H+ + D+ WS D ++S S D
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 107 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 166
Query: 460 RLIVSASDD 486
+ + S S D
Sbjct: 167 KYVASLSSD 175
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKMGISDVAWS 450
K V +V F P LA++ AD IK+W G+ EK +++ H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 451 SDSRLIVSASD 483
L+ S +D
Sbjct: 74 PSGELLASGAD 84
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 453
+ + H VS VK+ P G +LA++S D + IW D K+++GH+ ++ + ++
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 454 DSRLIVSASDDXNFK 498
DS I + S D K
Sbjct: 519 DSSCIATVSHDRTIK 533
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +1
Query: 223 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 402
+A + + K + TL T GH ++ V F P+G++L ++S DK ++W G
Sbjct: 315 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 403 KTISGHKMGISDVAWSSDSRLIVSASDD 486
GH + +A+ D L S D
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLD 402
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L H + + V FSP + LA++SAD+ K+W DG +T GH ++ VA+ +
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 463 LIVSASDDXNFK 498
+ + S D ++
Sbjct: 353 YLGTTSYDKTWR 364
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRL 465
GH K V SV FSPNG LAS D +IW K I H +S V + +
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 466 IVSASDD 486
+ +AS D
Sbjct: 481 LATASYD 487
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH+++V + F +G AS D L ++W G+ GH + V +S + +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 469 VSASDD 486
S +D
Sbjct: 439 ASGGED 444
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+++L +LAGH V+S+ + + +A+ S D+ IK+W
Sbjct: 497 DFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSD 456
+L GH V SVK++ NG WL ++S D++IK++ K ++ GH ++ +AW
Sbjct: 305 SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCH 364
Query: 457 SRLIVSASDD 486
VS S D
Sbjct: 365 EEYFVSGSSD 374
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 465
AGH V SV + P L S D+L+K+W G+ ++ GHK + V W+ +
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 466 IVSASDDXNFK 498
+++AS D K
Sbjct: 325 LLTASKDQIIK 335
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 NYTLKFTLAGHTK---AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
++ KF A K +++ V ++P+G L + S +W FE + H I
Sbjct: 109 SFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPI 168
Query: 433 SDVAWSSDSRLIVSASDDXNFK 498
+ WS + +VS D K
Sbjct: 169 RSMVWSHNENYMVSGDDGGTLK 190
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/79 (21%), Positives = 32/79 (40%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 441
++ + L H + + S+ +S N ++ S +K W + + HK I D+
Sbjct: 154 SFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDL 213
Query: 442 AWSSDSRLIVSASDDXNFK 498
++ S SDD K
Sbjct: 214 SFCKTDLKFCSCSDDTTVK 232
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 48.4 bits (110), Expect = 3e-06
Identities = 33/91 (36%), Positives = 44/91 (48%)
Frame = +1
Query: 205 PNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
P SL P S K PN + GHT AV+S+ +GEW+AS S D +++W
Sbjct: 395 PESLKPKLP-SRKDLRPYPN-SCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEV 452
Query: 385 YDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
G+ K + I VAW+ SRL V A
Sbjct: 453 ETGRCLK-VWQFDEAIMCVAWNPLSRLPVLA 482
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 283 LAGHTK--AVSSVKFSPNGEWLASSSADKLIKIW 378
L GH+ V KF P WL ++ AD +IK++
Sbjct: 718 LRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLY 751
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 47.2 bits (107), Expect = 7e-06
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Frame = +1
Query: 133 PLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSS--VAKPNYTLKFT-----LAG 291
P+G H A Q G + G + AP + +AKP+ ++ L G
Sbjct: 184 PIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKRLRG 243
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H AV +G ++ + S D+L+K+W + GH+ I+D+A SS++ I
Sbjct: 244 HRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 472 SASDD 486
SAS+D
Sbjct: 304 SASND 308
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS---SDS 459
GH ++ + S N ++AS+S D +I++W DG + GH ++ +A+S
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 460 RLIVSASDD 486
++S+SDD
Sbjct: 345 YQLLSSSDD 353
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTI 411
L GHT AV+++ FSP + L SSS D +IW A +F I
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRI 370
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+AGH +S V + PN ++A+ S+DK +++W G+ + GH+ + +A S D R
Sbjct: 498 MAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR 554
Query: 463 LIVSASDD 486
+ S +D
Sbjct: 555 YMASGDED 562
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +1
Query: 175 HGGP--SASLSGPNS--LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL 342
H GP SA+ S P LS SA + + K N L GH V +FSP G +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDAQFSPFGHYF 475
Query: 343 ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
AS S D+ +IW + + ++GH +SDV W + I + S D
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSD 520
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 220 QSAPQSNKSSVAKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
Q+ S+ S+ PN +TL GH+ V S FSP G+++ SSSAD I++W
Sbjct: 393 QAENDSSDQSIG-PNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA 451
Query: 397 FEKTISGHKMGISDVAWSSDSRLIVSASDD 486
GH + D +S S S D
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHD 481
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH V S+ SP+G ++AS D I +W + + GH + +++S + L+
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 469 VSASDDXNFK 498
S S D K
Sbjct: 599 ASGSADCTVK 608
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH V S+ +S G LAS SAD +K+W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 426
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 427 GISDVAWSSDSRLIVSASDD 486
+ V ++ VSAS D
Sbjct: 311 EVRAVTVHPTNKYFVSASLD 330
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/60 (20%), Positives = 30/60 (50%)
Frame = +1
Query: 307 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
++ F P+G L + ++ ++KIW GH ++ +++S + + +A++D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 426
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 427 GISDVAWSSDSRLIVSASDD 486
+ V ++ VSAS D
Sbjct: 311 EVRAVTVHPTNKYFVSASLD 330
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/60 (20%), Positives = 30/60 (50%)
Frame = +1
Query: 307 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
++ F P+G L + ++ ++KIW GH ++ +++S + + +A++D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDG--KFEKTISGHKMG 429
P+ T + L HT V ++FS NG++LASSS D+ IW + DG + T+ GH
Sbjct: 263 PSQTAQI-LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKP 321
Query: 430 ISDVAWSSDSRLIVS 474
+ + WS D R +++
Sbjct: 322 VIAILWSPDDRQVLT 336
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 337 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDXNFKSLG 507
++AS S D + IW GK + GH ++ V+WS ++ ++ SASDD + G
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 253 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
A + +LK TL GH K V ++ +SP+ + + A+++I+ W G + K GI
Sbjct: 305 ADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG--DCVHMYEKGGI 362
Query: 433 SDVA--WSSDSRLIVSASDD 486
S ++ W D + I++ D
Sbjct: 363 SPISCGWYPDGQGIIAGMTD 382
Score = 33.9 bits (74), Expect = 0.067
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 381
L GH AV+ V +SP N LAS+S D I+IWG
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Frame = +1
Query: 265 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GH 420
+T+KF H + +FSP+G++LASSS D I++W GK +K + H
Sbjct: 206 HTIKFGKKSHAECA---RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 421 KMGISDVAWSSDSRLIVSASDDXNFK 498
+ + +S DS ++ S S D K
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIK 288
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V + FS + E LAS S D IKIW G + H G++ +++S D ++
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 472 SASDD 486
S S D
Sbjct: 322 STSFD 326
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 187 SASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 366
S S G LS S Q+ + K LK GHT V+ F+ +G + ++S+D
Sbjct: 312 SFSRDGSQLLSTSFDQTARIHGLKSGKLLK-EFRGHTSYVNHAIFTSDGSRIITASSDCT 370
Query: 367 IKIW 378
+K+W
Sbjct: 371 VKVW 374
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L GH +VS + FS +G+ LAS D +++I+ A G + + G GI V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 463 LIVSASDD 486
++++ S+D
Sbjct: 169 IVLAGSED 176
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 268 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 447
TLK L G + V++ P G + + S D + +W A + SGH + ++ +
Sbjct: 146 TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDF 205
Query: 448 SSDSRLIVSASDD 486
+ D +LI + SDD
Sbjct: 206 TPDGKLICTGSDD 218
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 145 VPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKF 321
V GHP + T G ++ +SL+ S + + + +L HT +V VKF
Sbjct: 235 VKGHP--YHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKF 292
Query: 322 SPNGEWL---ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 474
SP+ + A+ DK + IW + I H+ G++ + W S+ + +
Sbjct: 293 SPSSATIPLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTWIGTSKYLAT 345
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H + V+S+ + ++LA+ A+ + IW + G T GH+ + ++ S+++ IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 472 SASDD 486
S S D
Sbjct: 387 SVSVD 391
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM---GISDVAWSSD 456
+GH V+ F+P+G+ + + S D + +W + + GH G++ + +S+
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 457 SRLIVSASDD 486
S L +S S D
Sbjct: 254 SSLAISGSKD 263
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 441
N+ FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 82 NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCA 141
Query: 442 AWSSDSRLIVSASDD 486
++ L+VSAS D
Sbjct: 142 SFHPKEDLVVSASLD 156
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 232 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-K 405
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +E
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 406 TISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
T+ GH +S V + + +IVS S+D + +
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIR 273
Score = 35.1 bits (77), Expect = 0.029
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
TL GH VSSV F + + S+S DK I++W A
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V V F + S D IK+W + + T+ GH I V + + IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 472 SASDDXNFK 498
SASDD +
Sbjct: 110 SASDDQTIR 118
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 484 DXNFK 498
D K
Sbjct: 72 DYKIK 76
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH V F P + + S+S D+ +++W
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 87 FTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
Query: 457 SRLIVSASDD 486
L+VSAS D
Sbjct: 147 EDLVVSASLD 156
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 232 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-K 405
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +E
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 406 TISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
T+ GH +S V + + +IVS S+D + +
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIR 273
Score = 35.1 bits (77), Expect = 0.029
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
TL GH VSSV F + + S+S DK I++W A
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V V F + S D IK+W + T+ GH I V + ++ IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 472 SASDDXNFK 498
SASDD +
Sbjct: 110 SASDDQTIR 118
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 484 DXNFK 498
D K
Sbjct: 72 DYKIK 76
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH V F P + + S+S D+ +++W
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
F L GH V+ + F G+ L SSS DK +++W + +SGH + V +
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPE 201
Query: 457 SRLIVSASDDXNFK 498
R +V+ S D +
Sbjct: 202 ERYVVTGSADQELR 215
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
V +V SP+ + +A + D +K++ KF ++ GHK+ + + SSD LIV+ S
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 484 DXNFKSLGT*F 516
D N K G F
Sbjct: 603 DKNLKIWGLDF 613
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 268 TLKFTLA--GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 441
+LKF L+ GH V + S +GE + + S DK +KIWG G K+I H + V
Sbjct: 571 SLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGV 630
Query: 442 AWSSDSRLIVSASDD 486
+ ++ + S D
Sbjct: 631 KFVRNTHYLFSIGKD 645
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
++ H +V VKF N +L S D+L+K W A + T+ GH I +A S+
Sbjct: 619 SIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRG 678
Query: 460 RLIVSASDDXNFK 498
+V+ S D + +
Sbjct: 679 DFLVTGSHDRSMR 691
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Frame = +1
Query: 184 PSASLSGPNSLSQSAPQSNKSSVAKPNY-------------TLKFTLAGHTKAVSSVKFS 324
PS+S GP SL+ ++ S+ SS+ Y T + H AV++++++
Sbjct: 57 PSSSRGGP-SLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYN 115
Query: 325 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
G LAS S D I +W + GH+ ++D+ + + +VS+S D
Sbjct: 116 KVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKD 169
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR-L 465
GH K V SV FSPNG LAS D +IW K I H +S V + R
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYF 229
Query: 466 IVSASDDXN 492
+ +AS D N
Sbjct: 230 LATASHDMN 238
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 441
L + + H VS VK+ P + LA++S D + IW D K++ GH K+ D+
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 442 AWSSDSR 462
A S SR
Sbjct: 266 AVDSSSR 272
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 187 SASLSGPNSLSQSAPQSNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSAD 360
S +GP + ++ SN SV + P++ T+A GH ++V ++ + G L S +
Sbjct: 175 SNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTE 234
Query: 361 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K++++W G + GH + + S R +S S D
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GHT V + G + S S+D +I++W
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 187 SASLSGPNSLSQSAPQSNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSAD 360
S +GP + ++ SN SV + P++ T+A GH ++V ++ + G L S +
Sbjct: 175 SNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTE 234
Query: 361 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
K++++W G + GH + + S R +S S D
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSD 276
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GHT V + G + S S+D +I++W
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVA 444
LK TL H VS V +SP+ L + +++K+W G T + G +S A
Sbjct: 261 LKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCA 320
Query: 445 WSSDSRLIVSASDD 486
W DS +V S D
Sbjct: 321 WFPDSTRLVCGSSD 334
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 447
LKF+ +K V F + ++AS S D + IW + K + +SGH M ++ V+W
Sbjct: 434 LKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW 493
Query: 448 S-SDSRLIVSASDDXNFKSLG 507
+ + R++ SASDD + G
Sbjct: 494 NPKNPRMLASASDDQTIRIWG 514
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 274 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS 450
K TL HT ++ ++FSP+ LA+SS DK +++W A + G +T GH ++ + +
Sbjct: 686 KTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFH 745
Query: 451 SDSRLIVSASDDXN 492
++ + D+ N
Sbjct: 746 PIKDDLICSCDNDN 759
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
++ +L GH ++SV + P+G++LAS S D ++K+W
Sbjct: 810 IRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVW 844
Score = 34.3 bits (75), Expect = 0.050
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 307 SSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
+ ++F P G++LA+SSA+ L+ + ++ GH I+ V W + S S+
Sbjct: 780 TQIRFQPRVGKYLAASSAN-LVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSE 838
Query: 484 D 486
D
Sbjct: 839 D 839
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
TL H ++S+ S +AS+S DKL+K+W
Sbjct: 898 TLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 420
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 421 KMGISDVAWSSDSRLIVSASDDXNFK 498
+M ++ VA D+ IVS+S D K
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLK 136
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 420
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 421 KMGISDVAWSSDSRLIVSASDDXNFK 498
+M ++ VA D+ IVS+S D K
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLK 136
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 465
+GH KAVS VKF N E LAS+S D +++W D +T GH + V + +S
Sbjct: 546 SGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
Query: 466 IVSASD 483
+ S+
Sbjct: 605 LACGSE 610
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 247 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 426
S+ +P+ K V SV +SPNG+ LA S D I ++ K + GH M
Sbjct: 142 SIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNM 201
Query: 427 GISDVAWSS-DSRLIVSASDD 486
+ + +S D R++ S SDD
Sbjct: 202 PVRSLVFSPVDPRVLFSGSDD 222
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +1
Query: 268 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 447
TL +++GHT V SV SP+G +A+ S+D+ +++W +T+S H + VA+
Sbjct: 234 TLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
L + S D+ +K+W + +T +GH +G++ +A + S+S D
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSID 81
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L GH AV + +F+ +G + + D+ I++W + G KT H + DV +SD+
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 463 LIVSASDD 486
S D
Sbjct: 74 KFCSCGGD 81
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T H + V V + + S D+ + W G+ + GH ++ V ++ S
Sbjct: 55 TYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Query: 460 RLIVSASDDXNFK 498
++VSA D + +
Sbjct: 115 SVVVSAGFDRSLR 127
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
GH V++VKF+ + + S+ D+ +++W
Sbjct: 100 GHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 420
TL GHTK VS V+F G + ++ D +K+W DG+ +T GH
Sbjct: 108 TLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLWSVEDGRVIRTYEGH 153
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V++
Sbjct: 179 FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH 238
Query: 451 SDSRLIVSASDD 486
+ +I++ S+D
Sbjct: 239 PELPIIITGSED 250
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT VS+V F P + + S D ++IW A + E T++ + + S
Sbjct: 224 TLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGS 283
Query: 460 RLIVSASDD 486
R +V D+
Sbjct: 284 RRVVIGYDE 292
Score = 30.7 bits (66), Expect = 0.62
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKMGISDVAWS-SDSRL 465
H + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 466 IVSASDDXNFK 498
SAS D K
Sbjct: 158 FASASLDRTIK 168
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +1
Query: 253 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 463 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 522
Query: 433 SDVAWSSDSRLIVSASDD 486
VA+ D + + S++ D
Sbjct: 523 LTVAFRPDGKQLASSTLD 540
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 469 VSASDDXNFKS 501
+SAS D ++
Sbjct: 407 LSASLDGTVRA 417
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 576
Query: 472 SASDDXNFKSL 504
++S F +L
Sbjct: 577 NSSSGKCFTTL 587
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 439 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 498
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 462
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 463 LIVSASDD 486
++ S D
Sbjct: 155 YLLVGSRD 162
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 268 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T T HT AV+++ F + L S+S D ++ W
Sbjct: 382 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAW 418
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +1
Query: 253 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 432
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 503 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 562
Query: 433 SDVAWSSDSRLIVSASDD 486
VA+ D + + S++ D
Sbjct: 563 LTVAFRPDGKQLASSTLD 580
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 469 VSASDDXNFKS 501
+SAS D ++
Sbjct: 447 LSASLDGTVRA 457
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 616
Query: 472 SASDDXNFKSL 504
++S F +L
Sbjct: 617 NSSSGKCFTTL 627
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 310 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 538
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 462
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 463 LIVSASDD 486
++ S D
Sbjct: 155 YLLVGSRD 162
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 268 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T T HT AV+++ F + L S+S D ++ W
Sbjct: 422 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAW 458
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 48 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 107
Query: 460 RLIVSASDD 486
+ + S S D
Sbjct: 108 KYVASLSSD 116
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 229 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAY--DGKF 399
P+ + P+ + +L GHTKAV+++ +S + LAS+ D + +W + D K
Sbjct: 139 PKGSSLQTEMPS-RMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKK 197
Query: 400 EKTISGHKMGISDVAWSSDSRLIVSASDD 486
+ H + DV WS ++S D
Sbjct: 198 VRAFLHHNAPVKDVKWSKQGLSLLSCGYD 226
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L H V+S+ S + LAS S D +K++ G+F+ I+ + I +A++
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 463 LIVSASDDXNFKSLGT 510
L+ +A DD K + T
Sbjct: 118 LLAAAGDDEGIKLINT 133
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 166 HQTHGGPSASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKFSPNGEWL 342
H G S +LS ++L S + + K P+ + + T + + F+ +G L
Sbjct: 60 HHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLL 119
Query: 343 ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 474
A++ D+ IK+ +DG + + GHK ++ + + + L+ S
Sbjct: 120 AAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLAS 163
Score = 33.5 bits (73), Expect = 0.088
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 277 FTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIW 378
F L G H +A+ + ++PNG+++A+S DK + +W
Sbjct: 231 FALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW 265
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
L GH V+ + F PNGE LAS + W +G T+ G
Sbjct: 142 LKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKG 186
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 451 SDSRLIVSASDD 486
+ +I++ S+D
Sbjct: 239 PELPIIITGSED 250
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 460 RLIVSASDD 486
R +V D+
Sbjct: 284 RRVVIGYDE 292
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 465
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 466 IVSASDDXNFK 498
SAS D K
Sbjct: 158 FASASLDRTIK 168
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 451 SDSRLIVSASDD 486
+ +I++ S+D
Sbjct: 239 PELPIIITGSED 250
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 460 RLIVSASDD 486
R +V D+
Sbjct: 284 RRVVIGYDE 292
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 465
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 466 IVSASDDXNFK 498
SAS D K
Sbjct: 158 FASASLDRTIK 168
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 451 SDSRLIVSASDD 486
+ +I++ S+D
Sbjct: 239 PELPIIITGSED 250
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 460 RLIVSASDD 486
R +V D+
Sbjct: 284 RRVVIGYDE 292
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 465
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 466 IVSASDDXNFK 498
SAS D K
Sbjct: 158 FASASLDRTIK 168
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 417
L GH+K V+ FS N +++ASSS DK I++W G + I G
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG 256
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
Query: 451 SDSRLIVSASDD 486
+ +I++ S+D
Sbjct: 239 PELPIIITGSED 250
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 460 RLIVSASDD 486
R +V D+
Sbjct: 284 RRVVIGYDE 292
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 465
H+ + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 466 IVSASDDXNFK 498
SAS D K
Sbjct: 158 FASASLDRTIK 168
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
+K LA ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFV 66
Query: 451 SDSRLIVSASDD 486
+ + +V+ +DD
Sbjct: 67 ARKQWVVAGADD 78
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWS-S 453
GH K V SV ++ NG LAS S D+ +IW K + GH + + W
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 454 DSRLIVSASDDXNFK 498
S L+ +AS D + +
Sbjct: 78 HSDLVATASGDKSVR 92
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL HT + P G + A SAD L+ +W D +T + + + ++++
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 460 RLIVSASDD 486
I SAS+D
Sbjct: 246 EYIASASED 254
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 184 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPN-GEWLASSSAD 360
P L G + S + KS KP KF HT++V + ++ LAS+SAD
Sbjct: 234 PCIQLGGIEEMIVS--KKKKSKKQKP----KFKEGSHTESVLGLAWNKEFRNILASASAD 287
Query: 361 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASDD 486
K +K+W G + T+ H + VAW+ + +++S S D
Sbjct: 288 KKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFD 330
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 190 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSAD 360
+ LS + S+ + S+ ++V K L +++ GH AVS V FS G +L S D
Sbjct: 214 SELSRKGTSSKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGND 272
Query: 361 KLIKIWGAY 387
K +KIW +
Sbjct: 273 KTVKIWDCF 281
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 190 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSAD 360
+ LS + S+ + S+ ++V K L +++ GH AVS V FS G +L S D
Sbjct: 240 SELSRKGTSSKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGND 298
Query: 361 KLIKIWGAY 387
K +KIW +
Sbjct: 299 KTVKIWDCF 307
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTI 411
AGHT SSV+F P W + + D + +W G+ +K I
Sbjct: 145 AGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKII 187
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTIS--GHKMGISDVAWSSDSR 462
H+ V+ +++SP+G + S+DK I+ G K + S GHK I V+WS DS+
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 463 LIVSASDDXNFK 498
+++ S D + K
Sbjct: 110 RVLTVSADKSAK 121
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDS 459
L H A++ +++SP+ AS A++ +W + + + H I+ +AWS ++
Sbjct: 352 LEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Query: 460 RLIVSASDD 486
+++ + S D
Sbjct: 412 KMVATGSID 420
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTI 411
GH ++ +V +SP+ + + + SADK K+W A DG I
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVI 135
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKMGISDVAWSSDSR 462
HT ++S+ +SPN + +A+ S D + ++ D I + H G++ VA+ D
Sbjct: 398 HTARINSLAWSPNNKMVATGSIDTCVIVY-EVDKPASSRITARNAHLGGVNAVAFIDDCT 456
Query: 463 LIVSASD 483
+ S D
Sbjct: 457 VASSGED 463
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSS-D 456
AGHT +V +++SP E AS S D + +W GK + H ++ ++W+
Sbjct: 266 AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLA 325
Query: 457 SRLIVSASDDXNF 495
S ++ S SDD F
Sbjct: 326 SCMLASGSDDGTF 338
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 38.3 bits (85), Expect = 0.003
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Frame = +1
Query: 166 HQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPN--YTLKFTLAGHTKAVSSVKFSPNGEW 339
H S +LS SL SA + + + L H A++++ S +G +
Sbjct: 190 HHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG-F 248
Query: 340 LASSSADKLIKIWGAYDGKFE--KTISGHKMGISDVAWSSDSRLIVSASDD 486
+ + SADK IK+W D K T++ H ++ +A S D +++ S + D
Sbjct: 249 VYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACD 299
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 235 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI- 411
S+KS V + K T H AVSS+ S +G L S+S D+ KIW D K +I
Sbjct: 173 SSKSYVEVRRHK-KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIE 231
Query: 412 SGHKMGISDVAWSSDSRLIVSASD 483
H I+ + S D + ++D
Sbjct: 232 KAHDDAINAIVVSKDGFVYTGSAD 255
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFE--KTISGHKMGISDVAW 447
L GH V SV ++ +G LA+ DK + IW D +F+ ++GH + V W
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 448 SSDSRLIVSASDDXNFK 498
++ S S D K
Sbjct: 148 HPTMDVLFSCSYDNTIK 164
Score = 34.7 bits (76), Expect = 0.038
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGKFE--KTIS----GHKMGISD 438
L GH++ V V + P + L S S D IKIW + DG + +T+S GH +
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 439 VAWSSDSRLIVSASDDXNFK 498
+++++ +V+ SDD K
Sbjct: 195 ISFNAAGDKMVTCSDDLAVK 214
Score = 33.5 bits (73), Expect = 0.088
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-----------TISG-HKMGI 432
GH+ V S+ F+ G+ + + S D +KIW + + T+SG H I
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTI 246
Query: 433 SDVAWSSDSRLIVSASDD 486
V WS D + A DD
Sbjct: 247 YSVHWSRDGVIASGAGDD 264
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTIS-GHKMGISD 438
L GHT V +V ++P + +AS SADK ++IW T GH++G D
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFD 69
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +1
Query: 214 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
L++S N V + LK H AVS + + L S S DK +K+W D
Sbjct: 225 LTKSVNPKNYVEVRRRKNVLKIR---HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDS 281
Query: 394 KFEKTISGHKMGISDVAWSSDSRLIVSASD 483
K ++I H I+ VA D L ++D
Sbjct: 282 KCLESIQAHDDAINTVAAGFDDLLFTGSAD 311
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDSRLI 468
H AVS + S +G L S S D+ +KIW D K E + H I+ VA S + +
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 469 VSASD 483
+SD
Sbjct: 224 TGSSD 228
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-H-KMGISDVAWSSDSR 462
GHT ++ + FS +G+W+ SSS D ++IW D K I G H + I+ ++ S +
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIW---DVILAKQIDGVHVDVPITALSLSPNMD 611
Query: 463 LIVSASDDXN 492
++ +A D N
Sbjct: 612 VLATAHSDQN 621
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKMGISDVAWSSDS 459
H ++ S+ F N L S+SAD +K+W DG + + SGH + + S+
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 460 RLIVSASDDXNFK 498
R I+SA D F+
Sbjct: 327 RHILSAGQDRAFR 339
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 465
H VSSV F PNG +A+S ++ IKIW KFE+ + H +++S L
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL--RKFEEVQTIHSFHAKTLSFSQKGLL 335
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 247 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 402
+V K TL + + H V+ S GE + S SADK I++W GK E
Sbjct: 879 NVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLE 930
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
TLAGH KAVS VKF + E + S+S D +K+W
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLW 920
Score = 30.7 bits (66), Expect = 0.62
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 337 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDXNFK 498
+LAS+ D +++IW A G+ + H+ V +S SD VS SDD + K
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVK 834
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
+++ ++++S +G+ S+ DKL+KIW A + T+ K +S VA SSD
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR-VSAVAISSD 115
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 468
G +V SV+++ G +++ ++ +++W K +T+ GH+ +AW +SR++
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAW--NSRIL 270
Query: 469 VSASDDXN 492
S S D N
Sbjct: 271 SSGSRDRN 278
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDS 459
L GH V +K+S + LAS D + +W + + ++ H + + WS S
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 460 RLIVS 474
L+ S
Sbjct: 354 SLLAS 358
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
P+ + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 416 PSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
T+ GH + + N L+S S D+ +++ F + GHK + + WS D
Sbjct: 252 TMGGHQTRTGVLAW--NSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD 309
Query: 457 SRLIVSASDD 486
R + S +D
Sbjct: 310 DRELASGGND 319
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 328 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDD 486
N +AS S DK +K+W GK + T+ H+ + VAW++ +++S S D
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRD 279
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIW 378
F + H VSS+ ++ + LA+ SAD+ +K+W
Sbjct: 339 FIIHAHDSEVSSISYNIHAPNLLATGSADESVKLW 373
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RL 465
HT++V + ++ LAS+SADK +K+W G + T+ H + VAW+ + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 466 IVSASDD 486
++S S D
Sbjct: 292 LLSGSFD 298
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISG 417
++S++ FT+ GH +A +SV ++ + LA+ S D+ +K+W + + I+
Sbjct: 351 QASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE-PSCIAT 409
Query: 418 HKM---GISDVAWSSDSRLIVS 474
H G+ +A+S D+ +++
Sbjct: 410 HNPNAGGLFFIAFSPDNPFLLA 431
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 199 SGPNSLSQSAPQSNKSSVAKPNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKI 375
S ++S+ ++NK S + + + GH + ++KFSP+G++LA+ D ++KI
Sbjct: 165 SSEETMSKVKVKTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKI 224
Query: 376 W 378
W
Sbjct: 225 W 225
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 415 GHKMGISDVAWSSDSRLIVSASDD 486
GH + D+AW SDS L++SAS D
Sbjct: 270 GHTGDVLDLAW-SDSNLLLSASKD 292
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H AVS + + L S+S D+ IK+W D K ++I H ++ V S+ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 472 SASDDXNFKS 501
S S D K+
Sbjct: 264 SGSADGTVKA 273
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 36.3 bits (80), Expect = 0.012
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 390
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 36.3 bits (80), Expect = 0.012
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 390
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DS 459
LAG +K S S +ASS+ D +++IW + + HK + + SS D
Sbjct: 580 LAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADP 639
Query: 460 RLIVSASDDXNFKSLGT 510
L+ S SDD S+GT
Sbjct: 640 TLLASGSDDGTGVSIGT 656
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+ GH+K VS VKF + L SSS D +K+W
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLW 730
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH + ++ ++++ NG+ L S + D +W A +G+ T GH + S DS
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 463 LIVSASDDXNFK 498
+++ S D K
Sbjct: 93 RLITGSADQTAK 104
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
T GH+ AV S + L + SAD+ K+W GK
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGK 112
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGH-KMGISDVAWSSDS 459
GH V V+++P GE S S D ++IW G+ + E +SGH K+ +V ++S
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLVAEEVVRKAES 322
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GH AV S N AS+SAD KIW A G E HK + A+S D+
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGD-ELHSFEHKHIVRACAFSEDT 109
Query: 460 RLIVS 474
+++
Sbjct: 110 HRLLT 114
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
GH++ V V +SP +G +L S+S D + G + T GHK + + ++
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 460 RLIVSASDDXNFK 498
SAS D K
Sbjct: 69 IRAASASADFTAK 81
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 36.3 bits (80), Expect = 0.012
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDGKFEKTISGHKMG--IS 435
+K+ H ++ S+ PNG WLA+ S D I I+ + +K +GH +
Sbjct: 447 IKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 506
Query: 436 DVAWSSDSRLIVSASDD 486
V +S D R ++S +
Sbjct: 507 QVNFSPDGRFVMSGDGE 523
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 426
T GH KAV + FS +G ++ DK IK W G+ T S K+
Sbjct: 321 TYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKI 369
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG--------------AYDGKFEKTIS- 414
L+ H V V++ PN E LASS D+ + +W A DG E S
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 415 -GHKMGISDVAWSSDSRLIVSASDDXN 492
GHK ISD AW+ D ++S+ + N
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDN 387
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 441
L GH + + +S E +L S S D+ I +W +K ++ GH+ I DV
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 442 AW-SSDSRLIVSASDD 486
AW + + SA DD
Sbjct: 225 AWHMKNENIFGSAGDD 240
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDSRL 465
H + ++ + F+P EW LA++S+D + ++ +S H+ + V W +
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHET 319
Query: 466 IVSASDD 486
++++S +
Sbjct: 320 VLASSGE 326
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 453
G + V SV ++ G LA ++ ++IW K +T+ GH++ + +AWSS
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSS 261
Score = 31.9 bits (69), Expect = 0.27
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 453
T+ GH V ++ +S + L+S S DK I + + K + GHK I + WSS
Sbjct: 246 TMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSK-LKGHKSEICGLKWSS 302
Query: 454 DSRLIVSASDD 486
D+R + S +D
Sbjct: 303 DNRELASGGND 313
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
L GH + +K+S + LAS D + +W + + H + +AWS
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWS 343
Score = 31.1 bits (67), Expect = 0.47
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
P + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 410 PTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 452
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 35.5 bits (78), Expect = 0.022
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
+ H A+ ++KFS +G++LASS D ++++W + K
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H AVSS+ L SSS D IK+W D K ++I H I+ V D +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFT 293
Query: 472 SASD 483
++D
Sbjct: 294 GSAD 297
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 453
G +V SV ++ G LA ++ ++IW A K +T+ GH++ + +AW S
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGS 304
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
LAGH V +K+S + LAS D + +W + + S H + +AWS
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWS 386
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
TL GHT V + SP+G+ + + + D+ ++ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 495
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 453
T+ GH V ++ + + L+S S DK I + + K ++GHK + + WS
Sbjct: 289 TMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSK-LAGHKSEVCGLKWSY 345
Query: 454 DSRLIVSASDD 486
D+R + S +D
Sbjct: 346 DNRELASGGND 356
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISD---VAWS 450
L GH V++V+F+ G+ L S S D+ I +W G + + SGH + + ++
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 451 SDSRLIVSASD 483
D +I S +D
Sbjct: 111 DDRTIITSGAD 121
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 457 SRLIV 471
S ++
Sbjct: 202 SEWVL 206
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH ++V++ F+ N + L +S +D+ I +W
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
TL GHT+AV +V + + + +S D ++++W +G + +G + A ++D+
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGL--SIAASKPLGCTIRALAADT 214
Query: 460 RLIVSASDD 486
+L+V+ D
Sbjct: 215 KLLVAGGTD 223
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 151 GHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPN 330
G ++ T +S GP + Q KSS + H ++ S+KFS +
Sbjct: 367 GRRSSSATDDSQESSFHGPERVR--VRQYGKSSKELTALYKTQEIQAHNGSIWSIKFSLD 424
Query: 331 GEWLASSSADKLIKIW 378
G++LAS+ D +I IW
Sbjct: 425 GKYLASAGEDCIIHIW 440
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 468
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 469 VSASDDXNFK 498
++ S D K
Sbjct: 209 LTGSLDKTAK 218
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 463 LIVSASDDXNFK 498
+++ S D K
Sbjct: 66 RLITGSADQTAK 77
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 468
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 469 VSASDDXNFK 498
++ S D K
Sbjct: 209 LTGSLDKTAK 218
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 463 LIVSASDDXNFK 498
+++ S D K
Sbjct: 66 RLITGSADQTAK 77
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 468
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 469 VSASDDXNFK 498
++ S D K
Sbjct: 209 LTGSLDKTAK 218
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 463 LIVSASDDXNFK 498
+++ S D K
Sbjct: 66 RLITGSADQTAK 77
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 35.1 bits (77), Expect = 0.029
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +1
Query: 214 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
L++S N V + LK H AVS + + + L S S DK +K+W D
Sbjct: 221 LTKSVNPRNYVEVRRRKNVLKIR---HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDS 277
Query: 394 KFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
K ++I H ++ V D L+ + S D K
Sbjct: 278 KCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLK 311
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
L+ TL GHT V ++ S G+ + S S D + +W + + + GH +S V
Sbjct: 891 LRATLKGHTGTVRAIS-SDRGK-IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML 948
Query: 451 SDSRLIVSASD 483
S R++ +A D
Sbjct: 949 SGERVLTAAHD 959
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKMGISDVAWSSD 456
LA H V SV++SP + + + SAD L++ W +G K K I+ H I + + +
Sbjct: 1058 LACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSIN-AGE 1116
Query: 457 SRLIVSASDD 486
+ L + A+D+
Sbjct: 1117 NWLGIGAADN 1126
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T+ + A+ S+++ + LA++ D + IW GK + GH I + D+
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT 1034
Query: 460 RLIVSASDD 486
+++ SDD
Sbjct: 1035 --LITGSDD 1041
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 457 SRLIV 471
S ++
Sbjct: 202 SEWVL 206
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 450
L GH ++V++ F+ N + L +S AD+ I +W G E ++ ++ WS
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP-GGSVEDEMAQGEVAEDKDNWS 449
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 322 SPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWS-SDSRLIVSASDD 486
SP+GE++ S S+D IW + + I GH ++ V WS S+ + +ASDD
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDD 403
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV-AWSSDSRLI 468
H A+ + + L ++S D+ IK+W + K + GH + + + ++S L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 469 VSASDDXNF 495
VS S D F
Sbjct: 187 VSGSRDGCF 195
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 34.7 bits (76), Expect = 0.038
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H + V + +G + + DK K+W G T++ H + +AW L+V
Sbjct: 72 HDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLV 131
Query: 472 SASDDXNFK 498
+ S D K
Sbjct: 132 TGSWDKTLK 140
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +1
Query: 244 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKF---EKT 408
SS PN + + T T ++SS+ FSP + L ++S D ++ W DG K
Sbjct: 10 SSTNNPNNSYEITPPA-TDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKV 68
Query: 409 ISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
H + AW D + + D K
Sbjct: 69 SMSHDQPVLCSAWKDDGTTVFTGGCDKQAK 98
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.3 bits (75), Expect = 0.050
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +1
Query: 211 SLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 390
S+ S + SS P + K TL+ H V +FSP+G + A+ AD IK++
Sbjct: 96 SIDFSVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV-- 152
Query: 391 GKFEKTISG 417
K ++ ISG
Sbjct: 153 PKVKQMISG 161
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIW 263
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 408
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 360 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 408
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 456
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESS 325
Query: 457 SRLIVSASD 483
+ + SD
Sbjct: 326 ALIAAGGSD 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDS 459
L GH +V SV +G + SSS D I +W + E +++S K ++ A S S
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQS 260
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 456
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESS 325
Query: 457 SRLIVSASD 483
+ + SD
Sbjct: 326 ALIAAGGSD 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDS 459
L GH +V SV +G + SSS D I +W + E +++S K ++ A S S
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQS 260
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 261 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 293
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
P+ L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 390 PSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 432
Score = 30.3 bits (65), Expect = 0.82
Identities = 11/51 (21%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS 453
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN 235
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 251 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 283
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
P+ L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 380 PSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 422
Score = 30.3 bits (65), Expect = 0.82
Identities = 11/51 (21%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS 453
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN 225
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L+GH KAVS KF N E L ++S D +K+W
Sbjct: 878 LSGHNKAVSYAKFLDN-ETLVTASTDNTLKLW 908
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 322 SPNGEWLASSSADKLIKIWGAY---DGKFEKT-----ISGHKMGISDVAWSSDSRLIVSA 477
SPNG +LA+++ +K+W DG ++ + GHK ++ + +S +S I++A
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 478 SDDXNFK 498
S D + +
Sbjct: 308 SKDGSIR 314
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH AV+ + FSPN E + ++S D I++W
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 319 FSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 480
FS +GEW+ SA K I IW G K + G K + D+AW +IVS S
Sbjct: 300 FSGDGEWVVGGSACKGEHKIYIWDRA-GHLVKILEGPKEALIDLAWHPVHPIIVSVS 355
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 301 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTI 411
A++SV +S G L S+ADK + +W G K +TI
Sbjct: 69 AITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTI 106
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISG--HKMGISDVAWSSDSR 462
HT ++SVKFS +G L S S D +K+W K K G + ++VA+S D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 463 LIVSAS 480
+I++ +
Sbjct: 432 IILTGT 437
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 34.3 bits (75), Expect = 0.050
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H ++ ++KFSP+G+++AS+ D ++++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 465
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 466 IVSASDD 486
+S S D
Sbjct: 378 FISGSID 384
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 34.3 bits (75), Expect = 0.050
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H ++ ++KFSP+G+++AS+ D ++++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 465
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 466 IVSASDD 486
+S S D
Sbjct: 378 FISGSID 384
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 34.3 bits (75), Expect = 0.050
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H+ AVS + + + L S+S D+ +K+W +D K ++I H ++ V +++S +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVT-TAESLVFT 192
Query: 472 SASD 483
++D
Sbjct: 193 GSAD 196
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 213 TYLGHTEEVCGLKWSESGKKLASGGNDNVVHIW 245
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 408
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 343 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 391
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 33.9 bits (74), Expect = 0.067
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGI--SDVAWSS 453
L GH V+++ ++ NG L S S D I IW K +I +GH I + +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 454 DSRLIVSASDDXNFKSLGT 510
L+VS + D + T
Sbjct: 106 SDELVVSGAGDAEVRLFNT 124
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 400 EKTISGHKMGISDVAWSSDSRLIVSASDD 486
E+ + GH+ ++ +AW+S+ L++S SDD
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDD 71
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 193 SLSGPNSLSQSAPQSNKSSVAKPN-YTLKFTLAGHTKAVSSVK----FSPNGEWLASSSA 357
++ +S + S+ Q++++S +K GH + +K GE++AS S
Sbjct: 582 TVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSD 641
Query: 358 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
D IW G+ K + G + ++ + ++ ++ D K
Sbjct: 642 DGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIK 688
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.9 bits (74), Expect = 0.067
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +1
Query: 190 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLI 369
A L G SLS++ S S KP L L H AV+ + S + + S+S D +
Sbjct: 1049 ADLVGEPSLSRT---SVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTV 1105
Query: 370 KIWGAYDGKFEKTIS 414
K+W + K EK IS
Sbjct: 1106 KVWDS--RKLEKDIS 1118
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H+ ++D+A SSD VSASDD K
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVK 1106
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.9 bits (74), Expect = 0.067
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H AV ++KFS + +LAS AD++I +W
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+L GH A+ + +S + + L SSS DK +++W
Sbjct: 501 SLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLW 532
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.9 bits (74), Expect = 0.067
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 441
L GH K + +SP E +L S S D+ I +W +K ++ GH+ I+DV
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 442 AW-SSDSRLIVSASDD 486
+W + L SA +D
Sbjct: 224 SWHMKNENLFGSAGED 239
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDSRL 465
H + V+ + F+P EW LA++S+D + ++ +S H+ + V W +
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHET 318
Query: 466 IVSASDD 486
++++S +
Sbjct: 319 VLASSGE 325
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSS 453
++ H+ V+ + F+P EW +A+ S DK +K++ T HK + V W+
Sbjct: 268 SVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNP 327
Query: 454 DSRLIVSA 477
+ I+++
Sbjct: 328 KNETILAS 335
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW 378
L F GHT +S ++P +W+ SS A D +++IW
Sbjct: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
GH V V+F+P GE AS S D I+IW
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GH AV S N AS+SAD K+W A G + HK + A+S D+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 460 RLIVS 474
+ +++
Sbjct: 115 KYLIT 119
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 289 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
GH++ V + +SP +G +L S+S D + G + T GHK + +++
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 460 RLIVSASDDXNFK 498
SAS D + K
Sbjct: 74 LRAASASADFSAK 86
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.1 bits (72), Expect = 0.12
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 223 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 402
S + SS P + K TL+ H V +FSP+G + A+ AD IK++ K +
Sbjct: 8 SVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVK 64
Query: 403 KTISG 417
+ ISG
Sbjct: 65 QMISG 69
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 408
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 374 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 422
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G+ LAS ++ IW
Sbjct: 244 TYLGHTEEVCGLKWSESGKKLASGGNYNVVHIW 276
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 408
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 376 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 424
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GHT+ V +K+S +G AS D ++ IW
Sbjct: 247 TYLGHTEEVCGLKWSESGNKQASGGNDNVVHIW 279
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +1
Query: 295 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 474
TK VSS+ SP+G+ L ++S +K + D K + +GH + VA++ D + ++S
Sbjct: 158 TKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLS 215
Query: 475 AS 480
++
Sbjct: 216 SA 217
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFE 402
FSP ++LA S+ D IKIW G+ +
Sbjct: 13 FSPALDYLALSTGDGRIKIWDTVKGQVQ 40
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEK--TISGHKMGISDVAWS 450
GH V V+ G+ +A++S+D IKI G + +G ++ T++GH+ + +VAW+
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWA 65
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H + V + +G + S DK K+W G T++ H+ I+ +AW L+
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 472 SASDDXNFK 498
+ S D K
Sbjct: 131 TGSWDKTLK 139
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 253 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISG 417
+ PN + + T ++SS+ FSP + L ++S D ++ W GA K
Sbjct: 12 SNPNKSYEVT-PSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASIS 70
Query: 418 HKMGISDVAWSSDSRLIVSASDDXNFK 498
H + AW D + S D K
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAK 97
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H ++ S+KFS +G +LAS+ D +I+IW
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDS 459
L GH S + PNG+ LA+ + D ++W + + K + G+ I + ++SD
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 460 RLIVSA 477
R + A
Sbjct: 375 RFLAMA 380
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +1
Query: 187 SASLSGPNSLSQSAPQSNKSSVAKPNYT----LKFTLAGHTKAVSSVKFSPNGEWLASSS 354
+AS G +L +S + + S+++ + T + F + + +S++ +SP G +LAS+S
Sbjct: 172 AASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLASAS 231
Query: 355 AD-KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNF 495
D IW G G GIS + WS +A D F
Sbjct: 232 YDSSSFTIWDVSQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTF 278
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 32.3 bits (70), Expect = 0.20
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 175 HGGPSASLSGPNSLSQ--SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLAS 348
H G + + S SL + P S+ + + F +G ++ S + + +GE +
Sbjct: 2585 HHGKATTTSTSGSLMRMFKGPASSGTGDWQFPQAQAFASSG-IRSSSVIAITSDGEIITG 2643
Query: 349 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
AD IK+ + K +T GH ++ +A S D+ +V+ S D
Sbjct: 2644 GHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRD 2689
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T GH V+ + SP+ +L + S D + +W
Sbjct: 2663 TAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFEKT-------------IS 414
+ GH AV V++SP+ + SSA D L+ IW YD +K+ +
Sbjct: 380 YKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD-YDRVSKKSDRAAKSPAGLFFQHA 438
Query: 415 GHKMGISDVAW-SSDSRLIVSASDD 486
GH+ + D W +SD IVS SDD
Sbjct: 439 GHRDKVVDFHWNASDPWTIVSVSDD 463
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 244 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
SS N+ ++ +GH AV+ V ++ GE+L S S D+ +++ A+
Sbjct: 398 SSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAW 445
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 13/60 (21%)
Frame = +1
Query: 238 NKSSVAKPNYTLKFT----LAGHTKAVSSVKFS---------PNGEWLASSSADKLIKIW 378
NK + T KFT L GHT + S+ FS PN L SSS DK+I+IW
Sbjct: 200 NKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIW 259
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 394 KFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
+ +K SGH ++DV W+ ++S S D
Sbjct: 406 QMQKVPSGHFAAVTDVTWARTGEYLLSVSQD 436
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + + + DK IK+W A G T GH+ + V + +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 521 QFIFSTALDGKIKA 534
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + + + DK IK+W A G T GH+ + V + +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 521 QFIFSTALDGKIKA 534
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 456
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
Query: 457 SRLIVSA 477
R + A
Sbjct: 374 GRYVAMA 380
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 456
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
Query: 457 SRLIVSA 477
R + A
Sbjct: 368 GRYVAMA 374
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 301 AVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEK-TISGHKMGISDVAWSSDSRLIVS 474
A+ + +SP+G ++S SAD +I I+ Y+ ++ HK + W S L+VS
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLLVS 643
Query: 475 ASDD 486
S D
Sbjct: 644 ISSD 647
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 292 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGISDVAWSSD 456
HTK + S+ SP N E A+S+ D + W + T+ + +++ + W+ D
Sbjct: 337 HTKRMRSLALSPSNRELFATSALDGAVHFWKLQSDRSTATLFKTVNRVAVDQKKWAED 394
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 301 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 456
A+ +S +G+++ + D L+++W D K GH +S VA+ S+
Sbjct: 347 ALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSN 398
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 453
+S +G++L + D L+++W D K GH +S VA+ S
Sbjct: 353 WSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS 397
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + ++ D K IK+W A G T GH+ + + + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 521 QFIFSTALDGKIKA 534
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + ++ D K IK+W A G T GH+ + + + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 521 QFIFSTALDGKIKA 534
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At1g30750.1 68414.m03758 expressed protein
Length = 212
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +1
Query: 142 PVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKF 321
P+ G P+ + P + P+S + P S+ SS + FT + +S V F
Sbjct: 122 PILGQPSTSSSLNQPLTGFNQPSSTGFNQPISSSSSSSSSAQNQPFTNRLNQNNLSGVPF 181
Query: 322 SPNGEWLASSSADKLIKIW 378
NG S K+I IW
Sbjct: 182 L-NGNSKLKVSGTKIIFIW 199
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVA---W 447
L GH +V V F P+ L + SAD ++IW + + H G+ VA W
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 448 SSDSRLIVSASD 483
+ ++I D
Sbjct: 73 LGEDKIISQGRD 84
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 387
H ++V +SP+ E +AS+S D + +W Y
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKLY 380
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG--I 432
+++L L GH K V+ + + L ++S D+ ++IW G+ ++ G ++G I
Sbjct: 133 SFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII 192
Query: 433 SDVAW 447
S+ W
Sbjct: 193 SEGPW 197
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +1
Query: 202 GPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 381
G N L A ++ + N TL HT V S+ ++L S S D +KIW
Sbjct: 276 GANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD--QFLLSCSLDNTVKIWA 333
Query: 382 AYDGKFEKTISGHK 423
A +G + HK
Sbjct: 334 ATEGGNLEVTYTHK 347
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 190 ASLSGPNSLSQSAPQSNKSSVAKPNY--TLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 363
ASLS L + + + PN TL+ TL+GH + + P+G ++ + DK
Sbjct: 283 ASLSPDGKLLAIVGDNPEGLIVDPNTGKTLE-TLSGHLDFSFASAWHPDGVTFSTGNQDK 341
Query: 364 LIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSA 477
++W + T+ G+ I + ++SD + + A
Sbjct: 342 TCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMA 380
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKMGISDVAWSSD- 456
GH+ + V G+ +A++S+D IKI G + + T++GH+ + VAW+
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68
Query: 457 -SRLIVSASDD 486
L+ S S D
Sbjct: 69 FGSLLASCSYD 79
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDSRL----IVSASDD 486
LAS D +K+W +G ++ ++ H + DVAW+ + L I S S+D
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSED 235
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDXNFK 498
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD + K
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDXNFK 498
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD + K
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVK 602
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GH AV S N AS+SAD K+W A G + HK + A+S D+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 460 RLIVS 474
+ +++
Sbjct: 115 KSLLT 119
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 426
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 427 GISDVAWSSDSRLIVSASDDXNFK 498
+ +++ SAS D + K
Sbjct: 63 AVWSSCLDNNALRAASASADFSAK 86
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 459
T GH AV S N AS+SAD K+W A G + HK + A+S D+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 460 RLIVS 474
+ +++
Sbjct: 115 KSLLT 119
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 426
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 427 GISDVAWSSDSRLIVSASDDXNFK 498
+ +++ SAS D + K
Sbjct: 63 AVWSSCLDNNALRAASASADFSAK 86
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNF 495
FSP G ++ S S D WG GK + G + W S + V+ S + F
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAF 316
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 319 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNF 495
FSP G ++ S S D WG GK + G + W S + V+ S + F
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAF 313
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 465
GH VS + +PN + + S+S D I++W + GH+ + + S+D +
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 466 IVSASDD 486
+VS D
Sbjct: 114 LVSCGTD 120
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 471
H++ ++ S +G +LA+ D+ + IW + + GH+ +S + + + +
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 472 SASDDXNFK 498
S S D K
Sbjct: 281 SGSFDRTVK 289
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 423
GH VS + F L S S D+ +K+W D F GH+
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQ 306
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 379 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
G Y ++GH+ I + WS D IVS SDD
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDD 256
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 459
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 460 RLIVSASDDXNFKSLG 507
LIV+A +D + G
Sbjct: 290 -LIVTAGEDCTCRVWG 304
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 379 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 486
G Y ++GH+ I + WS D IVS SDD
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDD 256
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 459
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 460 RLIVSASDDXNFKSLG 507
LIV+A +D + G
Sbjct: 290 -LIVTAGEDCTCRVWG 304
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +1
Query: 295 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 474
T +++ S +G + S D +++W GK ++GH ++ V+ S + I++
Sbjct: 357 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 416
Query: 475 ASDD 486
+ D
Sbjct: 417 SGRD 420
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 328 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDXNFK 498
N +A++S++ L +W G+ T++GH + V S SR +VSA+ D K
Sbjct: 285 NKSVIAATSSNNLF-VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIK 341
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 322 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 477
SP+ +++A+ SAD + +W G + I +WS + + SA
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASA 505
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+AGH+ AV+SV S NG + +S D + ++
Sbjct: 395 VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVF 426
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 393
K++ + FS + E+LA++S D +IW A DG
Sbjct: 165 KSIRDMDFSLDSEFLATTSTDGSARIWKAEDG 196
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 30.7 bits (66), Expect = 0.62
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Frame = +1
Query: 289 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG---AYDG--------KFEKTISGHKMGIS 435
GH ++V+ + FS + L S S D I++W +D +E + H M ++
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 436 DVA--WSSDSRLIVSASDDXNFK 498
D+ + + +I+S+S+D K
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCK 200
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 435
+ ++ +S G + + S D IK W DG T+SGHK +S
Sbjct: 589 IHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVS 631
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 30.3 bits (65), Expect = 0.82
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 286 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H ++ +KFS +G++LAS+ D ++++W
Sbjct: 254 SAHDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +1
Query: 130 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 309
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 426 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 484
Query: 310 SVKFSPNGE 336
+V+F P +
Sbjct: 485 TVQFPPRSQ 493
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +1
Query: 130 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 309
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 426 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 484
Query: 310 SVKFSPNGE 336
+V+F P +
Sbjct: 485 TVQFPPRSQ 493
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +1
Query: 130 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 309
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 184 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 242
Query: 310 SVKFSPNGE 336
+V+F P +
Sbjct: 243 TVQFPPRSQ 251
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 30.3 bits (65), Expect = 0.82
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Frame = +1
Query: 214 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAY 387
LS S+P N V K + LK ++ + + + P +W +A S + +K++
Sbjct: 17 LSDSSPAQN---VKK--FGLKNSIQTNFGSDYVFQIVPKIDWTAIAVSLSTNTVKLYSPV 71
Query: 388 DGKFEKTISGHKMGISDVAWSSDS----RLIVSASDDXNFKSLGT 510
G++ GH ++ +A+SSDS ++ S S D +S T
Sbjct: 72 TGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDT 116
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +1
Query: 193 SLSGPNSLSQSAPQSNKSSVAKPNYTLKF-TLAGHTKAVSSVKFSPNGEWLASSSADKLI 369
SLS L + +S + PN TL+GH + + P+G ++ + DK
Sbjct: 282 SLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTC 341
Query: 370 KIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLIVSA 477
++W + K + G+ I + ++SD + + A
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMA 378
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 30.3 bits (65), Expect = 0.82
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 262 NY-TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKMG 429
NY ++ L GH KA+ S+ F+ + + L S SAD+ ++IW D + + +SGH
Sbjct: 314 NYMAVRGALRGHDKAILSL-FNVS-DLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKP 371
Query: 430 ISDVAWSSDSRL-----IVSASDDXNFK 498
+ +A + L I+S S D K
Sbjct: 372 VKSLAAVREKELDDVVSIISGSLDGEVK 399
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 423
++ + FS +G LAS+ D +KI GK K ++GH+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHR 145
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 423
++ + FS +G LAS+ D +KI GK K ++GH+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHR 145
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 298 KAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 474
+ +S++ FS G ++ S +++KIW K + GH I+ V ++ + S
Sbjct: 93 ECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLAS 152
Query: 475 AS 480
S
Sbjct: 153 VS 154
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to beta-transducin
repeats containing protein - Homo sapiens,PID:e1284220;
3' EST no_NP:TC8031
Length = 1446
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
PN+ + + T A+S++ FSP+GE L + S + L+ W
Sbjct: 1305 PNFLRGASESAVTTAISALSFSPDGEGLVAFSENGLMIRW 1344
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 480
V+S+ F P A+ D + IW + K S + IS +++S D +L+ AS
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVAS 302
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + + + DK IK+W A G T GH+ + V +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 523 QFIFSTAVDGKIKA 536
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 414
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 292 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA--WSSDS 459
H V+ + FS PN + + + DK IK+W A G T GH+ + V +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENI 522
Query: 460 RLIVSASDDXNFKS 501
+ I S + D K+
Sbjct: 523 QFIFSTAVDGKIKA 536
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 414
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 262 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 396
++ L L GH K VS + + L + S D+ +++W G+
Sbjct: 140 SFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQ 184
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
TL GHT V S+ ++P + S+S D + +W A
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNA 94
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 447
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 243 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 302
Query: 448 SSDSRLIVSASDDXN 492
S RL+ + N
Sbjct: 303 SVSGRLLFAGYASNN 317
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
TL GHT V S+ ++P + S+S D + +W A
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNA 94
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 447
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 243 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 302
Query: 448 SSDSRLIVSASDDXN 492
S RL+ + N
Sbjct: 303 SVSGRLLFAGYASNN 317
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
L G+ A+ +KF+P G +LA + + I+ G + I+ +++S D+
Sbjct: 329 LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSPDTE 388
Query: 463 LIVSASDDXNFKSL 504
+ D + SL
Sbjct: 389 ALYVGVADRTYGSL 402
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 301 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 480
+V++ SP+G+ LA I ++ GK ++ GHK AW + ++ + +
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 481 DD 486
D
Sbjct: 310 QD 311
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS- 453
T H V ++P +G+ AS+S D ++IW + I H I W+
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKY 203
Query: 454 DSRLIVSASDDXNFK 498
D ++ ++S D K
Sbjct: 204 DDCILATSSVDKTVK 218
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIW 378
L GH AV VKFSP+ L AS S D + +W
Sbjct: 232 LNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLW 264
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 423
L ++ + FS +G LAS+ D +KI G K ++GH+
Sbjct: 102 LGAPPRSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHR 148
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +1
Query: 298 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 462
K V+S+ + P+G+ +A D I + +GK + + H + + + W D +
Sbjct: 65 KPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQ 119
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 483
++++ P + +++ D W GK + T GH + V S + I++ S+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 484 D 486
D
Sbjct: 222 D 222
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 411
+K T GH+ + +V + + + S D +IW GK K I
Sbjct: 193 IKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+L+GH V +++ +G LAS+ +D ++K+W
Sbjct: 275 SLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASD 483
+AS +KIW + H+ IS + ++SDS +L+V++ D
Sbjct: 108 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGD 156
Score = 20.6 bits (41), Expect(2) = 2.4
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +1
Query: 292 HTKAVSSVKFSPNGEWLASSSAD 360
H ++ +V+F +G+ + ++SAD
Sbjct: 50 HKESCRAVRFIDDGQRIVTASAD 72
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 280 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 447
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 181 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 240
Query: 448 SSDSRLIVSASDDXN 492
S RL+ + N
Sbjct: 241 SVSGRLLFAGYASNN 255
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 28.7 bits (61), Expect = 2.5
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Frame = +1
Query: 277 FTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW-----GAYDGKFEKT-------ISG 417
+ GH AV V++SP+ + SSA D L+ IW G + KT +G
Sbjct: 369 YKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAG 428
Query: 418 HKMGISDVAWS-SDSRLIVSASDDXNFKSLG 507
H+ + D WS + IVS SD N +S+G
Sbjct: 429 HRDKVVDFHWSLLNPWTIVSVSD--NCESIG 457
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 420
K++ K + FT GH VSS+ F L S S D + IW A + ++ GH
Sbjct: 247 KNNQVKDSVHCAFT--GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGH 304
Query: 421 K 423
+
Sbjct: 305 Q 305
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
L + S D IW E + H + D+AW ++R+ S S D + +
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVR 199
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
L + S D IW E + H + D+AW ++R+ S S D + +
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVR 199
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDXNFK 498
L + S D IW E + H + D+AW ++R+ S S D + +
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVR 199
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 480
+S ++++ + E++ K +I+ W ++ I GIS WS DSR I++ S
Sbjct: 50 ISYIEWALDSEYILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS 109
Query: 481 D 483
+
Sbjct: 110 E 110
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
+ H + ++KFSP+ LAS+ D I +W
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +1
Query: 259 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 414
P + +L GH K + + + L S S D +++W G+ +I+
Sbjct: 119 PGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSIN 170
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 322 SPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVA-WSSD 456
+P L SSS DK ++IW + + GH G+S + W D
Sbjct: 462 APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKD 509
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 283 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 378
L GH + V+ + +G + S+ D+ IK+W
Sbjct: 314 LVGHLEGVTFIDSRGDGRYFISNGKDQTIKLW 345
>At1g59453.1 68414.m06679 transcription factor-related weak similarity
to TFIIIC Box B-binding subunit [Homo sapiens] GI:442362
Length = 1729
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 369
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 1592 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 1635
>At1g59077.1 68414.m06670 hypothetical protein
Length = 665
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 369
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 528 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 571
>At1g58766.1 68414.m06659 hypothetical protein
Length = 665
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 241 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 369
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 528 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 571
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 304 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 480
V+++ F P AS D + IW + K S + I+ +++S D L+ AS
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVAS 301
>At5g51270.1 68418.m06356 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 819
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 199 ISWLKGHREFDVQQGGLARDLAAPCFNYRRTTLYVFVTPHNHYYTQNNKVNESFDKLKSF 20
+SW R+FD ++ ++ + F Y VTP HY+T N KL++
Sbjct: 303 VSWNPQFRDFDERKDAMSS--MSSNFEYGNV-----VTPLGHYFTDNQDTLNEISKLRAE 355
Query: 19 L 17
L
Sbjct: 356 L 356
>At5g01630.1 68418.m00079 BRCA2 repeat-containing protein low
similarity to breast cancer susceptibility protein
[Gallus gallus] GI:19568157; contains Pfam profile
PF00634: BRCA2 repeat
Length = 1155
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 211 SLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL--IKIWGA 384
++S S P + SSV+ ++ L ++ G + K + N W+A ++ + + I A
Sbjct: 1052 AISFSTPFMDDSSVSHISHNLVGSVVGFCNLIKRAKDATNEMWVAETTENSVYFINAEAA 1111
Query: 385 YDGKFEKTISGH 420
Y KT S H
Sbjct: 1112 YSSHL-KTRSAH 1122
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +1
Query: 340 LASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAW-------SSDSRLIVSASDDXNF 495
+ SSS + + AY K + KT+S ++ + DV W S + RL+ +D+ N
Sbjct: 224 MGSSSTYAALVYYSAYSEKEYGKTVSVNQFQVKDVRWDLGLGGQSMEMRLVEHFADEFN- 282
Query: 496 KSLG 507
K LG
Sbjct: 283 KQLG 286
>At3g55980.1 68416.m06220 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
PF00023: Ankyrin repeat
Length = 580
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 217 SQSAPQSNKSSVAKPNYTLKFTLAGH--TKAVSSVKFSPNG 333
+Q+APQSN S PN L++ + G K SV F +G
Sbjct: 482 TQAAPQSNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHG 522
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 271 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 384
+K L GH K ++ + FS L SS AD + W A
Sbjct: 907 VKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTA 944
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 301 AVSSVKFSPNGEWLASSSADKL 366
AV+SVKF+ NG + +S AD+L
Sbjct: 481 AVTSVKFACNGRKMLTSGADRL 502
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 124 NMVPLGPVPGHPAAHQTHG-GPSASLSGPNSLSQSAPQSNKSSVAKPNYTL 273
++ P P P P++ PS S S P+S SAP S+ S + P +L
Sbjct: 62 SLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSL 112
>At1g32760.1 68414.m04039 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 314
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 172 THGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGE 336
T+G + S P+ S S+ S KS + +FT+ G A+ VK P E
Sbjct: 37 TYGLLNLDSSSPSPPSPSSSSSAKSVITPMTPPERFTINGKEAAMMMVKSEPTTE 91
>At1g12130.1 68414.m01405 flavin-containing monooxygenase family
protein / FMO family protein contains similarity to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 470
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 284 RVNLRV*FGFATEDLFDCGADCDNEFGPDKLAEGPP*V*CAAGWPG 147
RV R G + ED+FD C+ F +LA P WPG
Sbjct: 150 RVQFRSSSGVSGEDIFDAVVICNGHFTEPRLAHIPG----IESWPG 191
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,945,803
Number of Sequences: 28952
Number of extensions: 252690
Number of successful extensions: 1555
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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