Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314E04f
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 176 2e-43
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 120 2e-26
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 118 7e-26
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 117 1e-25
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 111 1e-23
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 102 5e-21
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 98 1e-19
UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5; Olig... 94 2e-18
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 91 9e-18
UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5; ... 85 6e-16
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 84 1e-15
UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;... 74 2e-12
UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;... 73 3e-12
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 70 3e-11
UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n... 67 2e-10
UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1; Encephalit... 66 4e-10
UniRef50_A0LUL4 Cluster: Secreted protein precursor; n=1; Acidot... 34 1.4
UniRef50_Q4PCW3 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_UPI0000E4A1D5 Cluster: PREDICTED: similar to Platelet-a... 32 5.5
UniRef50_P70781 Cluster: ORF-1; n=1; Agrobacterium tumefaciens|R... 31 9.7
UniRef50_Q7G139 Cluster: Cyst nematode resistance gene candidate... 31 9.7
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 176 bits (429), Expect = 2e-43
Identities = 84/127 (66%), Positives = 95/127 (74%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
QLKK KK++GEIV KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQC
Sbjct: 50 QLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQC 109
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAY 110
YRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F
Sbjct: 110 YRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTT 169
Query: 109 KRPSTYF 89
KRP+T+F
Sbjct: 170 KRPNTFF 176
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 120 bits (289), Expect = 2e-26
Identities = 60/127 (47%), Positives = 82/127 (64%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
++ K KK+TGEI+ KNFG+++RY SRSG HN+Y+EYRDL+ GAV+Q
Sbjct: 66 KIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQM 125
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAY 110
Y +M +RH AR SI II ++ I A+ RR KQFH+S I+FPL R+ K +TF
Sbjct: 126 YDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRI--AKSKSTFVA 183
Query: 109 KRPSTYF 89
RP+T+F
Sbjct: 184 NRPNTFF 190
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 118 bits (284), Expect = 7e-26
Identities = 54/105 (51%), Positives = 69/105 (65%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
+LKK KK+ G+++ KNFGIWLRY+SR+G HNMY+EYRD ++ GAV Q
Sbjct: 49 KLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQM 108
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPL 155
Y +M +RHR R IQIIK + A C+R KQFHNS I+FPL
Sbjct: 109 YTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPL 153
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 117 bits (282), Expect = 1e-25
Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 2/126 (1%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
+L K K++ GEI+ KNFG+ LRY+SR+G HNMY+EYRDL+ GAV+Q
Sbjct: 63 RLNKAKRSGGEILACNRLNEPKKGQVKNFGVLLRYKSRTGTHNMYKEYRDLTRTGAVSQM 122
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLN--TF 116
Y DM RHRARA IQII+V I + C++P+V Q H ++FP+ K + H +R + F
Sbjct: 123 YGDMAGRHRARASCIQIIRVAEISDSDCKKPKVTQMHGKKLKFPILKPMPHVERKDRKLF 182
Query: 115 AYKRPS 98
+ KRPS
Sbjct: 183 STKRPS 188
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 111 bits (266), Expect = 1e-23
Identities = 64/130 (49%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Frame = -1
Query: 466 LKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCY 287
+ K KK TGEIV K FGIW+RY+SRSG HNMY+E+RD + GAV Y
Sbjct: 47 INKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMY 106
Query: 286 RDMGARHRARAHSIQIIK-VEVIKAAACRRPQVKQFHNSTIRFPLPKR---VHHYKRLNT 119
DM ARHRAR SI+I+K VEV K RR VKQ N ++FPLP R V
Sbjct: 107 ADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKV 166
Query: 118 FAYKRPSTYF 89
FA RPST++
Sbjct: 167 FAPHRPSTFY 176
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 102 bits (244), Expect = 5e-21
Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -1
Query: 388 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKV-EVIKAA 212
NF +WLRY SRSG HNMY+E+R LS A Y+DM ARHRAR SI I+K+ E+ K+
Sbjct: 434 NFAVWLRYNSRSGTHNMYKEFRALSRAEAAESLYQDMAARHRARFASIHILKIAEIEKSE 493
Query: 211 ACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 89
+RP +KQ ++FPLP R + + TFA +RP+T++
Sbjct: 494 DVKRPYIKQLMAPGLKFPLPHR--RPRHVGTFAGQRPNTFY 532
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 97.9 bits (233), Expect = 1e-19
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
+L K KK GEI+ KNF I L+Y SR+ V MY+EYRD+S GAV+Q
Sbjct: 56 RLNKVKKANGEILSVTRIFEKRPTYVKNFAILLQYRSRTNVVYMYKEYRDISKTGAVSQM 115
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRL--NTF 116
Y ++ HRA+ SIQII+V I A +RP+ QF NS ++FP +++ + +TF
Sbjct: 116 YEELAGSHRAQRSSIQIIRVSQIDAKLAKRPKTTQFFNSKLKFPAIRKLPMAPKALRSTF 175
Query: 115 AYKRPSTY 92
RP+T+
Sbjct: 176 TASRPTTF 183
>UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5;
Oligohymenophorea|Rep: 60S ribosomal L18A, putative -
Paramecium tetraurelia
Length = 192
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
+L K + + G+I+ K +GI L+Y+SR+ +HNMY+E+RD ++ GAV+Q
Sbjct: 61 RLNKLRPSHGQILAVQELFERRDTNVKTYGIVLKYQSRTTIHNMYKEFRDTTLNGAVSQL 120
Query: 289 YRDMGARHRARAHSIQIIKVEVI-KAAACRRPQVKQFHNSTIRFPLPK---RVHHYKRLN 122
Y++M HRA+ +I I++ V+ K+A +R + Q+ +IRFP+ K R H K
Sbjct: 121 YQEMAGNHRAQPQTIHILRTSVLTKSADIKRGKTNQYRGDSIRFPIVKTVPRASHKKFRT 180
Query: 121 TFAYKRPSTY 92
F KRP+ Y
Sbjct: 181 VFKAKRPNLY 190
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 91.5 bits (217), Expect = 9e-18
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -1
Query: 388 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 209
NFGIW+RY+SR+G HN Y+EYR+ ++ AV Y +M +RHR R+ +QIIK+ +
Sbjct: 151 NFGIWIRYQSRTGFHNSYKEYRETTMNKAVDALYEEMASRHRVRSSQLQIIKIAEVSDEN 210
Query: 208 CRRPQVKQFHNSTIRFPLPKRV--HHYKRLNT-FAYKRPS 98
RR +QF + FP+ +V H K T F YKRP+
Sbjct: 211 VRRENTRQFLAEDLSFPVVNKVMRHPSKATKTIFKYKRPN 250
>UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 153
Score = 85.4 bits (202), Expect = 6e-16
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = -1
Query: 466 LKKFKKTTGEIVXXXXXXXXXXXXXKNFG-IWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
+ KFK+TT EIV + G + LRY+S SG H + + C
Sbjct: 40 VSKFKQTTSEIVSVKRILEKTPLRLMSLGMVRLRYDSCSGTHKV------------LLFC 87
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAY 110
Y +RHRARAHSI+IIKVE +K + RR +KQF++S IRF L +R HH + F++
Sbjct: 88 YSGTPSRHRARAHSIKIIKVESVKTSKTRRVHIKQFYDSKIRFLLVQRYHHKRYRKLFSF 147
Query: 109 KRPSTY 92
+P TY
Sbjct: 148 CQPDTY 153
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 84.2 bits (199), Expect = 1e-15
Identities = 47/113 (41%), Positives = 60/113 (53%)
Frame = -1
Query: 466 LKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCY 287
LKK K+T GEI+ NFG+ LRY SR G HNMYRE R+ + A+ + Y
Sbjct: 46 LKKIKRTHGEILDCQHIEENGDFVK-NFGVLLRYRSRVGQHNMYREVRETTSARAMDKVY 104
Query: 286 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKR 128
+M + RAR H IQII V+ + RR +V F +RFP P H KR
Sbjct: 105 SEMAGQCRARYHDIQIINVKEVADEDVRREKVAMFTQKGVRFPHPCPYVHVKR 157
>UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L18ae,
putative - Trichomonas vaginalis G3
Length = 213
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/108 (33%), Positives = 55/108 (50%)
Frame = -1
Query: 469 QLKKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQC 290
++ + KK GE++ KN+GIWL Y S HN+Y+EYRD + GAVT+
Sbjct: 46 RIARLKKAHGEVLAVKHVIEPEPTRVKNYGIWLSYRSTRNHHNVYKEYRDTTTEGAVTKM 105
Query: 289 YRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 146
++ H A +I IIKV + + QF + I+FP+ K+
Sbjct: 106 LAELAGTHDTTADNISIIKVAEVADKDLVHKNISQFTHENIKFPILKQ 153
>UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18a - Entamoeba histolytica HM-1:IMSS
Length = 173
Score = 72.9 bits (171), Expect = 3e-12
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = -1
Query: 460 KFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRD 281
K KK E++ KN+ I+LRY S G+HN+ ++YRD++ GAV Q Y D
Sbjct: 46 KVKKINAELLQCQPIFEKNPTVVKNYQIFLRYVSAGGIHNITKQYRDVTRVGAVRQMYND 105
Query: 280 MGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLP--KRVHHYKRLN 122
+ +++R R IQ+I + + A + P + QF ++FP+ K V KR N
Sbjct: 106 LASQYRTRQDKIQLISITTVGDKAVKNPVLHQFVGHHVKFPMVHCKPVIASKRFN 160
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/103 (32%), Positives = 54/103 (52%)
Frame = -1
Query: 463 KKFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYR 284
+K KK G I+ K +GIW + + ++G N+++EYRD + GAV Q Y
Sbjct: 46 QKLKKKNGSIIIAQKIYEKKNNFVKTYGIWSKVKIKNGYVNLFKEYRDFMMTGAVEQFYI 105
Query: 283 DMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPL 155
++G R + + + I++VE IK + VKQF I +P+
Sbjct: 106 ELGGRFKIKPKDVTILRVERIKEIESSKSNVKQFLGKKINYPI 148
>UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18a,
putative - Leishmania major
Length = 179
Score = 66.9 bits (156), Expect = 2e-10
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = -1
Query: 367 YESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVK 188
Y R G M +E+RD+S GAV+Q Y D+ +RHRAR H+I+++ V+ I + +
Sbjct: 83 YSQRCGYTRMVKEFRDVSKTGAVSQAYHDLASRHRARYHNIEVLNVKSIPDHEVKHLSIA 142
Query: 187 QFHNSTIRFPLPKR 146
Q+H + FPL +R
Sbjct: 143 QYHAPNLSFPLLQR 156
>UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN L18A -
Encephalitozoon cuniculi
Length = 173
Score = 66.1 bits (154), Expect = 4e-10
Identities = 33/112 (29%), Positives = 57/112 (50%)
Frame = -1
Query: 460 KFKKTTGEIVXXXXXXXXXXXXXKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRD 281
K K T G I+ +N+GI Y SRSGVHN Y+E R +S A+ R+
Sbjct: 52 KIKATKGLIIDCKEIPEPSFKEVQNYGIRFVYRSRSGVHNAYKECRAISKCWAIDHVLRE 111
Query: 280 MGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRL 125
+ R + + ++ II V+V+ + +R + +F + + FP+ ++ + K L
Sbjct: 112 LAGRQKLKRSAVDIISVDVVPVESLKRAKTIEFADENVEFPIFTKIVNTKSL 163
>UniRef50_A0LUL4 Cluster: Secreted protein precursor; n=1;
Acidothermus cellulolyticus 11B|Rep: Secreted protein
precursor - Acidothermus cellulolyticus (strain ATCC
43068 / 11B)
Length = 201
Score = 34.3 bits (75), Expect = 1.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 232 VEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 89
+E ++AAA + P ++FHN +R L R H RL A +RP F
Sbjct: 120 IEELEAAATKIPLARRFHNDAVRATLAVRRHRLVRLLRLA-RRPEPAF 166
>UniRef50_Q4PCW3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3743
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 192 SNSSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVR 70
S+S+ S S C +V T T D +PSR G+++T N +R
Sbjct: 638 SSSNALLASVSDCSDVFTPTHDSLPSRELGVSVTGLNLELR 678
>UniRef50_UPI0000E4A1D5 Cluster: PREDICTED: similar to
Platelet-activating factor acetylhydrolase 2; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Platelet-activating factor acetylhydrolase 2 -
Strongylocentrotus purpuratus
Length = 2400
Score = 32.3 bits (70), Expect = 5.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 263 SPSSFNTDYQSGSNQGCCVSPS-TGQTVPQQHHQIPI 156
+PSSF++ S+ +SP T Q Q+HHQIP+
Sbjct: 1568 NPSSFDSTAPVSSSSSSLISPKQTSQERTQRHHQIPV 1604
>UniRef50_P70781 Cluster: ORF-1; n=1; Agrobacterium tumefaciens|Rep:
ORF-1 - Agrobacterium tumefaciens
Length = 156
Score = 31.5 bits (68), Expect = 9.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 240 LSKWK*SRLLRVAVHRSNSSTTAPSDSHCPNVCTTTRDLIPSR 112
+S W+ R A+ R + + +A S NV TT+RD PSR
Sbjct: 97 ISAWRPCPACRSAMPRRSGTVSAARCSSTANVSTTSRDFAPSR 139
>UniRef50_Q7G139 Cluster: Cyst nematode resistance gene
candidate-like protein; n=5; Triticeae|Rep: Cyst
nematode resistance gene candidate-like protein -
Triticum aestivum (Wheat)
Length = 921
Score = 31.5 bits (68), Expect = 9.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 162 NLMVLLWNCLTCGRRHAAALITSTLIICIE*ARALCLAPISL 287
NLM WN L C H ++L T +I C+ R+L P SL
Sbjct: 844 NLMHCSWNALPCNMEHLSSLETVIIIKCLN-IRSLPTLPQSL 884
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,100,526
Number of Sequences: 1657284
Number of extensions: 9144948
Number of successful extensions: 23423
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23412
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -