Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314E01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1GT55 Cluster: Putative uncharacterized protein precur...    33   3.0  
UniRef50_Q4YQG6 Cluster: Putative uncharacterized protein; n=5; ...    33   4.0  
UniRef50_Q73Q50 Cluster: Cysteine protease domain, YopT-type; n=...    33   5.2  
UniRef50_Q748I8 Cluster: HD domain protein; n=7; Desulfuromonada...    32   6.9  
UniRef50_Q4YPQ5 Cluster: Putative uncharacterized protein; n=4; ...    32   6.9  
UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:...    32   9.2  

>UniRef50_Q1GT55 Cluster: Putative uncharacterized protein
           precursor; n=1; Sphingopyxis alaskensis|Rep: Putative
           uncharacterized protein precursor - Sphingopyxis
           alaskensis (Sphingomonas alaskensis)
          Length = 322

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 397 PNNIIKDSLRVKQIFKTKNPHFDLNLISSSTANRRIYK 510
           P N ++D  R+ ++FK +NP  D+ L++S T   + YK
Sbjct: 155 PGNYMRDVDRLARLFKARNPAVDIRLMASWTRADQTYK 192


>UniRef50_Q4YQG6 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium berghei
          Length = 228

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = -1

Query: 467 KSK*GFFVLNICFTLKLSFIILLGIYYLYSVNSW**GIMYNCILTYITNKCEMYYESII 291
           KS   FF+L++   LKL F I+L I     +NS    I +N  L Y +NK  +Y+  I+
Sbjct: 111 KSSQSFFILSVWCFLKLLFYIILTILLSVFLNS---NITFNTQLIYFSNK-TLYFNYIM 165


>UniRef50_Q73Q50 Cluster: Cysteine protease domain, YopT-type; n=1;
           Treponema denticola|Rep: Cysteine protease domain,
           YopT-type - Treponema denticola
          Length = 264

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 356 IMYNCILTYITNKCEMYYESIIVENYPVCR 267
           ++Y  +L+Y     E Y+  I+ +NYP+CR
Sbjct: 76  VLYRYVLSYNYGDDEQYFSFIVYKNYPLCR 105


>UniRef50_Q748I8 Cluster: HD domain protein; n=7;
           Desulfuromonadales|Rep: HD domain protein - Geobacter
           sulfurreducens
          Length = 302

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -2

Query: 334 PILQTNVRCIMNQSLLKIILSAVDLDVI 251
           P+  T  RC+MN+ L  +ILSAVDL  I
Sbjct: 9   PLSLTTNRCLMNKELETLILSAVDLPTI 36


>UniRef50_Q4YPQ5 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 666

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -1

Query: 440 NICFTLKLSFII---LLGIYYLYSVNSW**GIMYNCILTYITNKCEMYYESIIVENY 279
           N  + ++L F+I   LL IYY+  + +    ++Y CI   +TN CE  Y+   VE Y
Sbjct: 217 NFIYLVQLFFLIFQSLLFIYYMLIIINKKYTLIY-CIQNILTNNCEYIYKKDKVEEY 272


>UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:
           Ymf77 - Tetrahymena pigmentosa
          Length = 1260

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
 Frame = -1

Query: 473 KFKSK*GFFVLNICFTLKLSFIILLGIY-YLYS---VNSW**GIMYNCILTYITNKCEMY 306
           KF +K   +V NI   +K   + L+ IY Y+YS   +N +   I++N I  YI       
Sbjct: 245 KFINKLIIYVFNINNLIKNIKLSLIYIYLYIYSNKYINKYI-YIIFNNIYIYIIK----- 298

Query: 305 YESIIVENYPVCR*FRCYSTVITVCRYYSLNSYRF*QLFGSCAGNKCIMKIDLIK 141
           Y  II+ N  + +     + +I    YY  N Y +  +F     N  I  I+ IK
Sbjct: 299 YNFIILNNNNIIKIIN-NNNIINNINYYLFNKYNYIDIFNILYNNYYIYYINKIK 352


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,087,941
Number of Sequences: 1657284
Number of extensions: 7490646
Number of successful extensions: 14193
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14192
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)