Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314D12f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 210 1e-53
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 202 5e-51
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 184 1e-45
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 4e-42
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 169 3e-41
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 165 4e-40
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 163 2e-39
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 161 1e-38
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 157 2e-37
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 155 4e-37
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 140 2e-32
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 135 5e-31
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 134 2e-30
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 132 6e-30
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 130 2e-29
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 118 6e-26
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 105 5e-22
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 84 2e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 81 1e-14
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 77 3e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 66 6e-10
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 61 2e-08
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 60 2e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 59 5e-08
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 54 2e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 1e-04
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 47 2e-04
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 44 0.002
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 43 0.005
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.009
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.14
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 36 0.43
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.56
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.74
UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;... 35 1.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3
UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3
UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome sh... 33 3.0
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 3.0
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 4.0
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 5.2
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 6.9
UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1; ... 32 6.9
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 32 6.9
UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1; ... 32 9.2
UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 210 bits (514), Expect = 1e-53
Identities = 100/155 (64%), Positives = 113/155 (72%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 235 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 414
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 415 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
++GH IE++PELPLVV
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVV 154
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 202 bits (492), Expect = 5e-51
Identities = 97/157 (61%), Positives = 112/157 (71%)
Frame = +1
Query: 49 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 228
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 229 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 408
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 409 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
Q++GH+I+ + E PLVV
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVV 157
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 184 bits (447), Expect = 1e-45
Identities = 88/152 (57%), Positives = 100/152 (65%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 244 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 423
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 424 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH I ++ E+PLV+
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVI 153
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 4e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 82 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 261
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 262 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 393
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 169 bits (412), Expect = 3e-41
Identities = 85/152 (55%), Positives = 98/152 (64%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 244 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 423
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 424 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+RGH I +PE+PLVV
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVV 153
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 165 bits (402), Expect = 4e-40
Identities = 82/155 (52%), Positives = 97/155 (62%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 235 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 414
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 415 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH I +PELPLV+
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVI 155
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 163 bits (396), Expect = 2e-39
Identities = 76/153 (49%), Positives = 97/153 (63%)
Frame = +1
Query: 61 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 240
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 241 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 420
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 421 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+RGH +E +PELPLV+
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVL 153
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 161 bits (390), Expect = 1e-38
Identities = 80/151 (52%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Frame = +1
Query: 70 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 246
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 247 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 426
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 427 XXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH I ++P++PLVV
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVV 155
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 157 bits (380), Expect = 2e-37
Identities = 78/154 (50%), Positives = 93/154 (60%)
Frame = +1
Query: 55 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 234
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 235 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 414
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 415 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLV 516
ARGH I + E+PLV
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLV 153
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 155 bits (377), Expect = 4e-37
Identities = 76/151 (50%), Positives = 94/151 (62%)
Frame = +1
Query: 67 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 246
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 247 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 426
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 427 XXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+RGH IE + E+P+VV
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVV 153
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 140 bits (338), Expect = 2e-32
Identities = 69/149 (46%), Positives = 88/149 (59%)
Frame = +1
Query: 73 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 252
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 253 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 432
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 433 XXXXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH I+ +PELPLVV
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVV 154
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 135 bits (327), Expect = 5e-31
Identities = 70/152 (46%), Positives = 90/152 (59%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 243
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 244 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 423
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 424 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH I +P++PLVV
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVV 154
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 134 bits (323), Expect = 2e-30
Identities = 64/131 (48%), Positives = 78/131 (59%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 306
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 307 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 486
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 487 IEKIPELPLVV 519
++ IPE+P V+
Sbjct: 139 VKTIPEIPFVI 149
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 132 bits (318), Expect = 6e-30
Identities = 59/109 (54%), Positives = 70/109 (64%)
Frame = +1
Query: 193 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 372
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 373 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
K WR+WH ARGH + +PE+PLV+
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVI 130
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 130 bits (314), Expect = 2e-29
Identities = 68/148 (45%), Positives = 81/148 (54%)
Frame = +1
Query: 76 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 256 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 435
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 436 XXXXXXXXXXXQARGHIIEKIPELPLVV 519
+ARGH I + LP++V
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIV 151
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 118 bits (285), Expect = 6e-26
Identities = 58/153 (37%), Positives = 89/153 (58%)
Frame = +1
Query: 61 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 240
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 241 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 420
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 421 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
QARGH++ ++ E+P+VV
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVV 151
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 105 bits (253), Expect = 5e-22
Identities = 61/150 (40%), Positives = 73/150 (48%)
Frame = +1
Query: 70 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 249
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 250 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 429
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 430 XXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+ARGH I +P +PLVV
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV 144
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 83.8 bits (198), Expect = 2e-15
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Frame = +1
Query: 70 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 249
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 250 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 426
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 427 XXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+ RGH+I+ +P LP+VV
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVV 148
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 81.4 bits (192), Expect = 1e-14
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +1
Query: 229 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 408
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 409 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 519
+RGH ++ + P+++
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMII 155
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 76.6 bits (180), Expect = 3e-13
Identities = 46/130 (35%), Positives = 60/130 (46%)
Frame = +1
Query: 130 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 309
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 310 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 489
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 490 EKIPELPLVV 519
EK+P LP+VV
Sbjct: 162 EKVPSLPVVV 171
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 160 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 306
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 65.7 bits (153), Expect = 6e-10
Identities = 41/148 (27%), Positives = 67/148 (45%)
Frame = +1
Query: 76 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 256 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 435
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 436 XXXXXXXXXXXQARGHIIEKIPELPLVV 519
+ RGH + ++ ++P V+
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVI 144
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 60.9 bits (141), Expect = 2e-08
Identities = 44/139 (31%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = +1
Query: 109 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 282
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 283 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 462
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 463 XXQARGHIIEKIPELPLVV 519
RGHII+ I ELP+V+
Sbjct: 132 TVAGRGHIIDGI-ELPIVI 149
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.5 bits (140), Expect = 2e-08
Identities = 38/101 (37%), Positives = 51/101 (50%)
Frame = +1
Query: 73 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 252
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 253 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 375
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 59.3 bits (137), Expect = 5e-08
Identities = 38/131 (29%), Positives = 57/131 (43%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 306
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 307 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 486
SG+ A GGR+ P ++ +ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 487 IEKIPELPLVV 519
+ P+VV
Sbjct: 140 FKDSVRFPIVV 150
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 54.4 bits (125), Expect = 2e-06
Identities = 38/131 (29%), Positives = 53/131 (40%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 306
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 307 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 486
+ GGR P KP R+W + R H+
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 487 IEKIPELPLVV 519
E ELP VV
Sbjct: 133 FE--GELPKVV 141
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +1
Query: 127 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 300
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 47.2 bits (107), Expect = 2e-04
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 11/147 (7%)
Frame = +1
Query: 112 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIP- 288
GA+ +P VF +PIR D+VN VH ++KN + E +S G +P
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKND----STTDEIQLCFLLDSQGKRTPCTDVPA 70
Query: 289 -RVRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXX 438
+ R + +CR AP K WRRWH
Sbjct: 71 TKPRPSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSA 130
Query: 439 XXXXXXXXXXQARGHIIEKIPELPLVV 519
ARGH +E +PE+PLVV
Sbjct: 131 IAASAVPSLLLARGHRVEGVPEVPLVV 157
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 44.4 bits (100), Expect = 0.002
Identities = 41/147 (27%), Positives = 52/147 (35%), Gaps = 7/147 (4%)
Frame = +1
Query: 100 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 258
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 259 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 438
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 439 XXXXXXXXXXQARGHIIEKIPELPLVV 519
RGH E P+++
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIII 182
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 42.7 bits (96), Expect = 0.005
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +1
Query: 76 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 255
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 256 WGTGRAVARIPRVRGG 303
G ++R+PR+ GG
Sbjct: 63 TRPGLGISRMPRIAGG 78
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.9 bits (94), Expect = 0.009
Identities = 24/57 (42%), Positives = 27/57 (47%)
Frame = +3
Query: 303 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGSSRCCYRRPSARSG 473
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAG 188
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 371 VGANIRPPRHMLPKAP*P 318
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.3 bits (80), Expect = 0.43
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 474 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 373
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.56
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +1
Query: 103 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 276
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 277 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 360
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.74
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 277 ARIPRVRGGGTHRSGQGAFGNMCRGG 354
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -2
Query: 220 SRSKAASSSWT*KREHH*PGPDVWAP*TRTGGAWLHP--APSRSSLNTPTLKVGLPIDSF 47
S+ K ++S T + P VW P T G W P AP R S TP G P+ S
Sbjct: 77 SKEKRGATSRTCYQTLRGPQRAVWEPGKATAGCWGPPRAAPGRESTGTPCRDPGDPLRSH 136
Query: 46 RYFSEAIPPKY 14
R PP +
Sbjct: 137 RAPLHEWPPPH 147
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 2.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 247 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 357
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 411
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 75 SVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQ 224
SVG E RDGAG + PP + A + Q VQELEA L +E+
Sbjct: 211 SVGEDEETRDGAGHDEPPPAPAEPASEAALAQ-AQLAQVQELEAKLQQER 259
>UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 2
SCAF15032, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 33.5 bits (73), Expect = 3.0
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 348 WWTYVRPHEA---LAALAPSRQPPTAE-SGLGSSRCCYRRPSARS 470
WWT RPH +A AP R P T SGLGS YRRP R+
Sbjct: 306 WWT--RPHRRGTRPSARAPPRVPATPPPSGLGSGCYGYRRPLGRT 348
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 3.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 350 PRHMLPKAP*PDLWVPPPR 294
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 4.0
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 58 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 231
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 232 GHQTSAESWGTGRAVARIPR 291
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 112 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 279
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 280 RIPRVRGGGTHRSGQG 327
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 5.2
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 193 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 360
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 64 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPD---LVNDVHVSMSKNSRQPYCVSKEAG 234
ARP ++ Y + G ++PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 235 HQTSAESWGTGRAVARIPRVRGGGTH 312
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04675.1 - Gibberella zeae PH-1
Length = 285
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 371 VGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALV 240
V A IRP H L K P PD+W+ P T+ + + A H S +
Sbjct: 163 VQAQIRPD-HTLFKPPVPDMWLDPEHTKAVLSGAGLDVHTSTAI 205
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 353 PPRHMLPKAP*PDLWV--PPPRTRGIRATARPVP 258
PP LP P PD +V PPP+ G A PVP
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVP 385
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 365 ANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSA 246
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
>UniRef50_UPI0000F2DA02 Cluster: PREDICTED: similar to ZP1; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to ZP1 -
Monodelphis domestica
Length = 649
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 353 PPRHMLPKAP*PDLWVPPPR-TRGIRATARPVPHDSA 246
PPR LP P P L PPR TR R+T RP P SA
Sbjct: 148 PPRPSLPARPRPPLSAQPPRSTRPPRST-RPPPPPSA 183
>UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 481
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 299 PRTRGIRATARPVPHDSALVW*PASLLT-Q*GCLEFLDIET 180
P + +RATAR A VW P LL Q GC+E +DIET
Sbjct: 21 PLPKLLRATARVPKLLRAAVWLPVLLLLPQLGCVEEVDIET 61
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,552,384
Number of Sequences: 1657284
Number of extensions: 10973994
Number of successful extensions: 37231
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 35309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37176
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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