Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   2.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   2.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   2.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   8.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 449 NLKFEGESQHKSSGKRIKLKENKIDNEIIVPR 354
           N+K E ES  +      KLK++  D+E   PR
Sbjct: 79  NVKKEDESDEEKPTTSFKLKDSSSDSEDERPR 110


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 217 RYLNTTTVLNLILRIKVQMQFKISL 143
           R L T +V  + + + V +QFKISL
Sbjct: 358 RELVTASVATIAIYLIVLLQFKISL 382


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 217 RYLNTTTVLNLILRIKVQMQFKISL 143
           R L T +V  + + + V +QFKISL
Sbjct: 358 RELVTASVATIAIYLIVLLQFKISL 382


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 217 RYLNTTTVLNLILRIKVQMQFKISL 143
           R L T +V  + + + V +QFKISL
Sbjct: 358 RELVTASVATIAIYLIVLLQFKISL 382


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 281 NKLKQFACEQKYNIDKYEEKLSISEYNNSFKFNIEN 174
           NKL     +      K EEKL + ++ NS +  +++
Sbjct: 3   NKLNMVLVKSMLQRIKMEEKLVVEKFLNSLQIYLQH 38


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 238 SMLYFCSHANCFNLFI 285
           S+ YFC  A C N  I
Sbjct: 381 SIQYFCLMARCLNTLI 396


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 338 LVENKTNAYQEQNANLSTINKLKQ 267
           L++NK N +QE  A      + KQ
Sbjct: 90  LIKNKPNWWQELEAKFDPKGEYKQ 113


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -1

Query: 233 YEEKLSISEYNNSFKFNIENKSTNAVQDKSERSSQISIFES 111
           Y + +S + Y N    ++ N  +   Q  SER++ +   ++
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPESPYPQIGSERATPVGYHQN 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,686
Number of Sequences: 336
Number of extensions: 1396
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)