Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314D11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_45608| Best HMM Match : HATPase_c (HMM E-Value=2.2e-09) 32 0.25
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_56783| Best HMM Match : YicC_N (HMM E-Value=8.6e-07) 31 0.58
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 31 0.76
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 31 0.76
SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38) 30 1.3
SB_49885| Best HMM Match : Phi-29_GP4 (HMM E-Value=3.4) 29 1.8
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_44106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 4.1
SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 28 5.4
SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46) 28 5.4
SB_6867| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.5) 28 5.4
SB_43149| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_29782| Best HMM Match : RnaseH (HMM E-Value=0.15) 27 7.1
SB_6651| Best HMM Match : Death (HMM E-Value=2.2e-18) 27 7.1
SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 27 9.4
SB_8392| Best HMM Match : Helicase_C (HMM E-Value=0.057) 27 9.4
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_18955| Best HMM Match : rve (HMM E-Value=5.9e-17) 27 9.4
SB_11999| Best HMM Match : B5 (HMM E-Value=7) 27 9.4
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 34.3 bits (75), Expect = 0.062
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = -1
Query: 392 KENK-IDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKLS 216
KENK + E+ +I K +L E K +++ + + + K + A E+KYN + E++
Sbjct: 146 KENKELKEELEDLKISKNELEEKKLGLEKKKTSEIEDLEKERNEA-EKKYNSLRKEKENL 204
Query: 215 ISEYNNSFKFNIENKSTNAVQD 150
+SE F+ +E + ++ V++
Sbjct: 205 VSELTKKFEM-LEGQKSSLVEE 225
>SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -1
Query: 461 EYGINLKFEGESQHKSSGKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTI 282
E G+ + E Q +R K + ++ ++E++ +EN+ +E+N L+ +
Sbjct: 459 ESGVLQPIDLEIQEVVKRERKKQRNRIASSKCRKRKLEREARLENRVKDLKERNIELNAV 518
Query: 281 -NKLKQFACEQKYNIDKYEEKLSISEYNNSF 192
N LKQ C+ K + + + L + Y F
Sbjct: 519 ANALKQQVCDLKQRVMDHVDILLSAVYEQRF 549
>SB_45608| Best HMM Match : HATPase_c (HMM E-Value=2.2e-09)
Length = 244
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -1
Query: 476 NDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDNEIIVPRIEKKD 339
N V+ G+ + F GE + +G + L+EN ++++ P I KD
Sbjct: 189 NYVYLNTGLTIVFNGEKYYSENGLKDLLQENSTESDLRYPIIHLKD 234
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 338 LVENKTNAYQEQNANLSTINKLKQFACE-QKYNIDKYEEKLSISEYNNSFKFNIENKSTN 162
L++ Y E + +TIN+L + + + ++ +I +E ++ N+ K +E+
Sbjct: 1301 LIKQNQTLYLETESLKATINELSEKSAQLREVSIHLTKENEKLTTENDDIKTRLEHTEKE 1360
Query: 161 AVQDKSERSSQISIFESSDCDVD 93
+ + ERSS ++ ESS +++
Sbjct: 1361 LRKTEGERSSVYALNESSRSELE 1383
>SB_56783| Best HMM Match : YicC_N (HMM E-Value=8.6e-07)
Length = 251
Score = 31.1 bits (67), Expect = 0.58
Identities = 25/119 (21%), Positives = 49/119 (41%)
Frame = -1
Query: 518 DVDQNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDNEIIVPRIEKKD 339
++D+N VN+ K EG+S K RI + ++ +I+ K+
Sbjct: 85 EIDENEWKEISQVVNEALENILTFRKDEGKSLEKDFQLRITNIRSYMEEALILDPERIKN 144
Query: 338 LVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKLSISEYNNSFKFNIENKSTN 162
+ + A E N+ N+ +Q +D EEK+ ++ + + F ++ K N
Sbjct: 145 IKDRLLTAIDELKVNVDE-NRFEQELIYYLEKLDITEEKVRLTNHLDYFLETLKGKEAN 202
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = -1
Query: 344 KDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL--SISEYNNSFKFNIENK 171
K+ +E N + N+N+S ++++++ A E K I + EKL ++E+ + ++
Sbjct: 108 KESLEEARNYREMVNSNISCLDEVRKDAEELKREISDHAEKLRQKVNEHESCLHAKVDKY 167
Query: 170 STNAVQDKSERSSQISIFESSD 105
+ Q + + S+ SI + D
Sbjct: 168 FIDTYQSELDASNFTSIKKRLD 189
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = -1
Query: 344 KDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL--SISEYNNSFKFNIENK 171
K+ +E N + N+N+S ++++++ A E K I + EKL ++E+ + ++
Sbjct: 108 KESLEEARNYREMVNSNISCLDEVRKDAEELKREISDHAEKLRQKVNEHESCLHAEVDKY 167
Query: 170 STNAVQDKSERSSQISIFESSD 105
+ Q + + S+ SI + D
Sbjct: 168 FKDTYQSELDASNFTSIKKRLD 189
>SB_34697| Best HMM Match : Ion_trans (HMM E-Value=7.9e-38)
Length = 1851
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -1
Query: 329 NKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKLSISEYNNSFKFNIENKSTNAVQD 150
+K +E N L T+N ++ K IDK E+ + +Y+ + I ST +Q
Sbjct: 477 DKVELERELNKILLTLNSQNEYIESLKKEIDKSEKNWLVFKYDRTRSHTIAANSTVRLQP 536
Query: 149 KSERSSQIS 123
+ RS I+
Sbjct: 537 LAFRSRTIA 545
>SB_49885| Best HMM Match : Phi-29_GP4 (HMM E-Value=3.4)
Length = 307
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 512 DQNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRI 399
D+ L+N+ P++ D+ +EY + Q K G+RI
Sbjct: 223 DRRRLMNSNPNIRDIQSEYPALFDCNQQKQQKERGERI 260
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -1
Query: 431 ESQHKSSGKRIKLKENKIDNE--IIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFAC 258
E + KSSG +K +N+ D+E ++ R+ ++ +++ A + + A LS + + K+ A
Sbjct: 583 EEEAKSSGNILKDLQNRFDDEKDALLRRLREE---QDRLLAEKRRQAELSRLRREKRLA- 638
Query: 257 EQKYNIDKYEEKLSISEYNNSFKFNIENK 171
E++ D L ++E N + N+E K
Sbjct: 639 EREGRFDDAALLLGLAERN---RLNLEEK 664
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = -1
Query: 428 SQHKSSGKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQK 249
S++ S K+N D+E + EN N Q N N + +Q +
Sbjct: 69 SKNNSDSDYNNNKDNNNDDE------NSNSIDENSINNSQGCNNNNDKVVTTQQCKDDNN 122
Query: 248 YNI-DKYEEKLSISEYNNSFKFNIENKSTNAVQDKSERSSQ 129
N +K + S S+YNN+ N +++++N++ + S +SQ
Sbjct: 123 NNNGNKNSKNNSDSDYNNNKDNNNDDENSNSIDENSINNSQ 163
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = -1
Query: 350 EKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKLSISEYNNSFKFNIENK 171
+K+ ++ N ++N N N K N +K + S S+YNN+ N +++
Sbjct: 31 QKQQQQKDDNNNNNKRNNNDDDKNNSKDD--NNNNNGNKNSKNNSDSDYNNNKDNNNDDE 88
Query: 170 STNAVQDKSERSSQ 129
++N++ + S +SQ
Sbjct: 89 NSNSIDENSINNSQ 102
>SB_44106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -1
Query: 398 KLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL 219
++KENKIDN IV ++K LVE + ++ + + +N ++ + N D Y
Sbjct: 126 QVKENKIDNSDIVIELDK--LVEKEMSSIEMLSYANYELNCRRRECIKPDLN-DDYTSLF 182
Query: 218 SISEYNNSFKFNIENKSTNAVQDKSERSSQISIFESSDCDV 96
S S N F F ++ + D + + CDV
Sbjct: 183 SSSVPINKFLFG--GDTSKRLDDIDKTKQHYICSQERGCDV 221
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -1
Query: 398 KLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL 219
++KENKIDN IV ++K LVE + ++ + + +N ++ + N D Y
Sbjct: 2 QVKENKIDNSDIVIELDK--LVEKEMSSIEMLSYANYELNCRRRECIKPDLN-DDYTSLF 58
Query: 218 SISEYNNSFKF 186
S S N F F
Sbjct: 59 SSSVPINKFLF 69
>SB_59005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.7 bits (61), Expect = 3.1
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -1
Query: 437 EGESQHKSSGKRIKLKENK-IDNEIIVPRIEKKDLVEN-KTNAYQEQNANLSTINKLKQF 264
E ES+ +S KRI ENK DN R + +V N K N+ +T NK
Sbjct: 376 EEESKKESEVKRINASENKDSDNVDFEFRRSRSFVVPNRKRPELSRSNSFTATSNKPLSS 435
Query: 263 ACEQKYNIDKYEEKLSISEYNNSFK 189
+ N ++ ++ S NSFK
Sbjct: 436 TSTSRMNGERSPMFVTRSSERNSFK 460
>SB_16056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -1
Query: 395 LKENKIDNEIIVPRIEKKDLVENK-TNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL 219
+ +N+ID ++++ E DL ++ ++ INKL+Q + N+D Y K
Sbjct: 34 VNDNRIDGQVLLILTEN-DLKDSLGIRVLGDRKRLWLAINKLQQEHSKSALNLDTYSRKK 92
Query: 218 SISEYNNSFKFNIENKSTNAVQDKSERSSQISIFESSD 105
S+ ++++ I + +N D E S+ +S+ + S+
Sbjct: 93 SLDFKDSAY---ISSSDSN---DDEEGSNSLSLADVSE 124
>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1816
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -1
Query: 509 QNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDN--EIIVPRIEK-KD 339
+ HL + +++F + G K E S K++ +++ K K+ + EII P+IEK +D
Sbjct: 348 RRHLTKLMKKSDEIFTKDGGFTKLELASA-KNTTHQLEAKAGKLRDLDEIIAPKIEKPED 406
Query: 338 LVENKTNAYQEQNANLSTINKL 273
L E + Q I KL
Sbjct: 407 LEEEIMETEEIQEGITDMIAKL 428
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.3 bits (60), Expect = 4.1
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -1
Query: 464 AEYGINLKFEGESQHKSSGKRIK-----LKENKIDNEIIVPRIE-----KKD-LVENKTN 318
AE+ LK + ES K +G+R K ++E + + RIE K D L + K
Sbjct: 1836 AEFNEKLKDQKESHEKGAGEREKELLQQVEELSTQVKTLEQRIEQLVIVKMDALHDQKAT 1895
Query: 317 AYQEQNANLSTINKLKQFACEQKYNIDKYEEKLSISEYNNSFKFNIENKSTNAVQDKSER 138
+E N + +NK + E + Y+ KL ++++S + K + + ER
Sbjct: 1896 LIEEHNTAIEKLNKEHEAKLESVERL--YKAKLDEKDFDHSSQVKQLLKEFHIKYGEKER 1953
Query: 137 SSQISI 120
Q ++
Sbjct: 1954 ELQDTV 1959
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = -1
Query: 428 SQHKSSGKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQ 267
S H+ + K ++ ++ ++ E+I+ + + +L N A +EQ + +N L++
Sbjct: 2745 SDHEIAFKNMEARKERLQQEVILAKQREGELQNNLQKALKEQTNLKTQLNDLQE 2798
>SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1400
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -1
Query: 509 QNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDN--EIIVPRIEK-KD 339
++HL + ++F + G + E S K++ ++++ K K+ + EII P+IEK +D
Sbjct: 15 RSHLTKLMKKSEEIFTKDGGFTELELASA-KNTTQQLEAKAGKLRDLDEIIAPKIEKPED 73
Query: 338 LVENKTNAYQEQNANLSTINKL 273
L E + Q I KL
Sbjct: 74 LEEEIMETEEIQEGITDMIAKL 95
>SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46)
Length = 521
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = -1
Query: 422 HKSSGKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYN 243
H R ++KENKIDN IV ++K LVE ++ + + +N ++ + N
Sbjct: 352 HAHKLHRAQVKENKIDNSDIVIELDK--LVEKGMSSIEMLSYANYELNCRRRECIKPDLN 409
Query: 242 IDKYEEKLSISEYNNSFKF 186
D Y S S N F F
Sbjct: 410 -DDYTSLFSSSVPINKFFF 427
>SB_6867| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.5)
Length = 325
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 410 GKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKY 231
G + ++KENKIDN IV ++K LVE ++ + + +N ++ + N D Y
Sbjct: 191 GLQAQVKENKIDNSDIVIELDK--LVEKGMSSIEMLSYANYELNCRRRECMKPDLN-DDY 247
Query: 230 EEKLSISEYNNSFKF 186
S S N F F
Sbjct: 248 TSLFSSSVPINKFLF 262
>SB_43149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -1
Query: 398 KLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL 219
++KENKIDN IV ++K LVE + ++ + + +N ++ + N D Y
Sbjct: 82 QVKENKIDNSDIVIELDK--LVEKEMSSIEMLSYANYELNCRRRECIKPDLN-DDYTSLF 138
Query: 218 SISEYNNSFKF 186
S S N F F
Sbjct: 139 SSSVPINKFLF 149
>SB_29782| Best HMM Match : RnaseH (HMM E-Value=0.15)
Length = 781
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -1
Query: 398 KLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKLKQFACEQKYNIDKYEEKL 219
++KENKIDN IV ++K LVE + ++ + + +N ++ + N D Y
Sbjct: 156 QVKENKIDNSDIVIELDK--LVEKEMSSIEMLSYANYELNCRRRECIKPDLN-DDYTSLF 212
Query: 218 SISEYNNSFKF 186
S S N F F
Sbjct: 213 SSSVPINKFLF 223
>SB_6651| Best HMM Match : Death (HMM E-Value=2.2e-18)
Length = 466
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 419 KSSGKRIKLKENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKL 273
K G+R+KLKE+ +DN I + K+ N +++ NA +TI L
Sbjct: 86 KDVGRRLKLKESILDN-IEDENRKTKEKSTQMLNKWKQLNAASATIQVL 133
>SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 636
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -1
Query: 509 QNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDN--EIIVPRIEK-KD 339
++HL + ++F + G + E S K++ ++++ K K+ + EII P+IEK +D
Sbjct: 399 RSHLTKLMKKSEEMFTKDGGFTELELASA-KNTTQQLEAKAGKLRDLDEIIAPKIEKPED 457
Query: 338 LVENKTNAYQEQNANLSTINKL 273
L E + Q I KL
Sbjct: 458 LEEEIMETEEIQEGITDMIAKL 479
>SB_8392| Best HMM Match : Helicase_C (HMM E-Value=0.057)
Length = 276
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -1
Query: 257 EQKYNIDKYEEK--LSISEYNNSFKFNIENKSTNAVQDKSERSSQISIFES--SDCDVD 93
+QK ID K +++S+Y ++ F + T AV ++ + S FES +CD D
Sbjct: 112 DQKIAIDTANGKDVMAVSKYPHTPGFQNNSAKTTAVPSDPKQKTLFSCFESLIEECDDD 170
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -1
Query: 257 EQKYNIDKYEEKLSISEYNNSFKFNIENKST 165
E+K ++YE+++ I+E+ + ++ I +K T
Sbjct: 432 EEKQEAERYEDEVEINEFPQTARWKITSKET 462
>SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = -1
Query: 509 QNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDN--EIIVPRIEK-KD 339
++HL + ++F + G + E S K++ ++++ K K+ + EII P+IEK +D
Sbjct: 15 RSHLTKLMKKSEEMFTKDGGFTELELASA-KNTTQQLEAKAGKLRDLDEIIAPKIEKPED 73
Query: 338 LVENKTNAYQEQNANLSTINKL 273
L E + Q I KL
Sbjct: 74 LEEEIMETEEIQEGITDMIAKL 95
>SB_18955| Best HMM Match : rve (HMM E-Value=5.9e-17)
Length = 421
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = -1
Query: 389 ENKIDNEIIVPRIEKKDLVENKTNAYQEQNANLSTINKL-KQFACEQKYNIDKYEEKLSI 213
+NK+ E + + + N+T A + N + + + F YN + +KL
Sbjct: 155 KNKVLQEFLTRNNVRHFVTYNETKAQVVERFNRTLKETMWRMFTTSNNYNYIDHLDKLVD 214
Query: 212 SEYNNSFKFNIENK--STNAVQDKSERSSQISIF 117
YN SF +I+ + N + IS++
Sbjct: 215 GNYNRSFHRSIKMRPIDVNVFNAQESGRGDISVY 248
>SB_11999| Best HMM Match : B5 (HMM E-Value=7)
Length = 103
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -1
Query: 509 QNHLLNAVPSVNDVFAEYGINLKFEGESQHKSSGKRIKLKENKIDN--EIIVPRIEK-KD 339
+ HL + ++F + G + E S K++ +++ K K+ + EII P+IEK +D
Sbjct: 15 RRHLTKLMTKSEEIFTKDGGFTELELASA-KNTTHQLEAKAGKLRDLDEIIAPKIEKPED 73
Query: 338 LVENKTNAYQEQNANLSTINKL 273
L E + Q I KL
Sbjct: 74 LEEELMETEEIQEGITDMIAKL 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,794,660
Number of Sequences: 59808
Number of extensions: 154655
Number of successful extensions: 585
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -