Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.88 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    26   0.88 
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   6.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 428 SQHKSSGKRIKLKENKIDNEIIVPRIEKKD 339
           + HK  G  +K++  KID +   PRIE K+
Sbjct: 672 ASHKPGGGNVKIETKKIDIK-AAPRIEAKN 700


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -1

Query: 344 KDLVENKTNAYQEQNANLSTINKLKQFACEQKYNID-KYEEKLSISEYNNS--FKFNIEN 174
           ++ VEN  +     N N  +INK K+   ++K N   K  E L IS+  +    K   E 
Sbjct: 78  REAVENIPSPRNGPNINEGSINKRKKKKSKKKQNKPRKRPEALLISDCTSEELAKLLKEM 137

Query: 173 KSTNAVQDKSERSSQI 126
           K ++A++   E  S++
Sbjct: 138 KQSDALKSVGETISKV 153


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 239 DKYEEKLSISEYNNSFKFNIENKSTNAVQDKSER 138
           D +  +  ++  +  +KF IEN    ++QD  E+
Sbjct: 688 DTFSNEYVLTNLDEIYKFEIENDDMLSIQDYWEQ 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,123
Number of Sequences: 2352
Number of extensions: 5693
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)