Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22...    96   1e-20
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478...    85   3e-17
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010...    62   3e-10
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     27   9.1  
01_07_0321 + 42715969-42716233,42716320-42716399,42716545-427166...    27   9.1  
01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099...    27   9.1  

>06_01_0023 +
           227014-227166,227893-228001,228096-228157,228284-228493,
           228609-228696,228774-228936,229037-229235,229456-229653,
           229887-230018,230182-230302,230453-230563,230710-230779,
           230880-231063,231137-231346
          Length = 669

 Score = 96.3 bits (229), Expect = 1e-20
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +1

Query: 304 TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYTAGK 483
           TELGHG+ V+GLETTAT+DPKT EFV+HSP+LT+ KWW GGL   + + +V A+L T GK
Sbjct: 143 TELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKASTHAVVYARLITEGK 202

Query: 484 CHGIH 498
            +GIH
Sbjct: 203 DYGIH 207


>06_02_0320 -
           14347195-14347443,14347573-14347674,14347747-14347851,
           14347938-14348084,14348171-14348290,14348743-14348878,
           14349198-14349328,14350854-14350928,14351040-14351139,
           14351213-14351385,14351474-14351581,14351674-14351791,
           14353477-14353970
          Length = 685

 Score = 85.0 bits (201), Expect = 3e-17
 Identities = 37/66 (56%), Positives = 51/66 (77%)
 Frame = +1

Query: 304 TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYTAGK 483
           TELGHG+ VRG+ET ATYD KT+EFV+++P  +A K+W+GG A+ A + IV AQL+  G+
Sbjct: 197 TELGHGSNVRGIETVATYDIKTREFVINTPCESAQKYWIGGAANHATHTIVFAQLHINGR 256

Query: 484 CHGIHA 501
             G+HA
Sbjct: 257 NEGVHA 262


>11_06_0340 -
           22500411-22500566,22500660-22500783,22500914-22501080,
           22501157-22501336,22501544-22502427,22502728-22502843,
           22503745-22504217
          Length = 699

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 27/58 (46%), Positives = 39/58 (67%)
 Frame = +1

Query: 295 FI*TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQL 468
           F  TEL HG+ V+ L+TTAT+DP T EF++++P+  A KWW+G  A    +  V A+L
Sbjct: 189 FAMTELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFATVFARL 246


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 508 DEGRGCRGISRRCTAEPSRYN 446
           D+G G R  ++RC A+PS Y+
Sbjct: 163 DQGCGARRQTQRCEADPSNYD 183


>01_07_0321 +
           42715969-42716233,42716320-42716399,42716545-42716613,
           42716710-42716791,42716902-42716996,42717129-42717203,
           42717385-42717436,42717442-42717630,42717667-42717752,
           42717827-42717902,42718001-42718164,42718307-42718426
          Length = 450

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 264 NWNLIVYEPLIDICPDFVND 205
           +WN+ V +P +DI  DF++D
Sbjct: 362 SWNMKVVKPCVDIVRDFLSD 381


>01_06_1486 -
           37709159-37709377,37709558-37709821,37709903-37709995,
           37710387-37710581,37710665-37710763,37710884-37711132,
           37711264-37711467,37711543-37711602,37711731-37711913,
           37712382-37712999,37713101-37713169,37713275-37713853
          Length = 943

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 351 CCCLKTTDESTVTQ-FCLNK*NLSRFNRVANWNL 253
           CC + T D  T T+ F +N  + S F   A+WNL
Sbjct: 222 CCSVSTVDCKTTTEAFKINGQHGSDFINSADWNL 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,412,644
Number of Sequences: 37544
Number of extensions: 220935
Number of successful extensions: 521
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)