Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D10f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac...    93   8e-20
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil...    93   8e-20
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac...    85   3e-17
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil...    81   3e-16
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac...    62   3e-10

>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
           acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
          Length = 675

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = +1

Query: 304 TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYTAGK 483
           TELGHG+ V+GLETTAT+DPKT EFV+H+P+ TA KWW GGL   + + +V A+L T GK
Sbjct: 138 TELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGK 197

Query: 484 CHGIH 498
            +GIH
Sbjct: 198 DYGIH 202


>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
           similarity to acyl-CoA oxidase [Arabidopsis thaliana]
           GI:3044214
          Length = 664

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 37/65 (56%), Positives = 51/65 (78%)
 Frame = +1

Query: 304 TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYTAGK 483
           TELGHG+ V+GLETTAT+DPKT +F++HSP+ T+ KWW GGL   + + ++ A+L T GK
Sbjct: 138 TELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSKWWPGGLGKVSTHAVIYARLITNGK 197

Query: 484 CHGIH 498
            HG+H
Sbjct: 198 DHGVH 202


>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
           acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
           GI:8515709
          Length = 675

 Score = 85.0 bits (201), Expect = 3e-17
 Identities = 37/69 (53%), Positives = 51/69 (73%)
 Frame = +1

Query: 295 FI*TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYT 474
           F  TELGHG+ VRG+ET  TYDPKT+EFV+++P  +A K+W+GG A+ A + IV +QL+ 
Sbjct: 186 FAMTELGHGSNVRGIETVTTYDPKTEEFVINTPCESAQKYWIGGAANHATHTIVFSQLHI 245

Query: 475 AGKCHGIHA 501
            G   G+HA
Sbjct: 246 NGTNQGVHA 254


>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
           similarity to acyl-CoA oxidase ACX3 GI:8163758 from
           [Arabidopsis thaliana]
          Length = 675

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +1

Query: 295 FI*TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQLYT 474
           F  TELGHGT VRG+ET  TYDP T+EFV+++P  +A K+W+G  A+ AN+ IV++QL  
Sbjct: 186 FAMTELGHGTNVRGIETVTTYDPTTEEFVINTPCESAQKYWIGEAANHANHAIVISQLSM 245

Query: 475 AGKCHGIH 498
            G   GIH
Sbjct: 246 NGTNQGIH 253


>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
           acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
          Length = 692

 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +1

Query: 295 FI*TELGHGTFVRGLETTATYDPKTKEFVLHSPSLTAYKWWLGGLAHTANYCIVMAQL 468
           F  TEL HG+ V+GL+TTAT+DP   EFV+ +P+  A KWW+G  A    +  V A+L
Sbjct: 183 FAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARL 240


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,177,148
Number of Sequences: 28952
Number of extensions: 176314
Number of successful extensions: 404
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)