Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314D07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 136 2e-33
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 95 7e-21
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 64 9e-12
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 5e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 43 3e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 41 1e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 38 0.001
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 35 0.006
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 26 3.0
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 26 3.9
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 26 3.9
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 9.0
SPCC61.02 |spt3||histone acetyltransferase complex subunit Spt3|... 25 9.0
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 25 9.0
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 136 bits (329), Expect = 2e-33
Identities = 70/159 (44%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Frame = +3
Query: 9 AIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWC 188
A+ +FV F DG L+ + S+ +P + + + VLVA NFD++V D TK VLVEFYAPWC
Sbjct: 328 AMTKFVGDFVDGKLQPKIKSQPIPE--SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWC 385
Query: 189 GHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD--Y 362
GHCK L P Y+KL E + +D +V++AKIDAT N++ I+ FPTI + +++V+ Y
Sbjct: 386 GHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS-VSISGFPTIMFFKANDKVNPVRY 444
Query: 363 XGERTLAGLTKFVETDGEGAEPVPSVTEFEEEEDVPARD 479
G+RTL L+ F++ EP+ +E+E VPA D
Sbjct: 445 EGDRTLEDLSAFIDKHA-SFEPIK-----KEKESVPAPD 477
Score = 65.3 bits (152), Expect = 5e-12
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 153 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT--ANELEHTKITSFPTI 326
K ++V+FYAPWCGHCK L P Y+ + E D + + ++D T + I +PT+
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEK-DGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 327 KLYSKDNQVHDYXGERTLAGLTKFV 401
++ Q+ Y G R L K++
Sbjct: 99 NVFKNGKQISQYSGPRKHDALVKYM 123
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 94.7 bits (225), Expect = 7e-21
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Frame = +3
Query: 111 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI--DATA 284
L + NFD+VV D K VLVEFYA WCG+CK+L P Y+ LG+ F+N+ +V I KI D A
Sbjct: 145 LDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFA 204
Query: 285 NELEHTKITSFPTIKLYSKDNQVHD--YXGERTLAGLTKFVETDGEGAEPVPSVTEFEEE 458
+ ++ SFPTIK + KD++ Y G+R+L L +++ G + P T
Sbjct: 205 DIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKK-SGTQRSPDGTLLSTA 263
Query: 459 EDVPARDE 482
+P DE
Sbjct: 264 GRIPTFDE 271
Score = 79.4 bits (187), Expect = 3e-16
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Frame = +3
Query: 87 WAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIA 266
+A+ V++ + + + K L+EFYA WCGHCK L P+Y++LG FE+ +DV+I
Sbjct: 18 FASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIG 77
Query: 267 KIDATANE--LEHTKITSFPTIKLYSKD-NQVHDYXGERTLAGLTKFV 401
KIDA + + IT FPT+ + D ++ Y R + LT+FV
Sbjct: 78 KIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFV 125
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 64.5 bits (150), Expect = 9e-12
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Frame = +3
Query: 162 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITSFPTIKLY 335
LV FYAPWCG+CK+LVP Y KL + + V DA N ++ FPTIKL
Sbjct: 52 LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111
Query: 336 ---SKDNQVH--DYXGERTLAGLTKFV 401
SK + + DY G+R+ L KFV
Sbjct: 112 YPSSKGSSLSSTDYNGDRSYKSLQKFV 138
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 45.6 bits (103), Expect = 5e-06
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 153 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKL 332
K +V+FYA WCG CK L P +KL E I D ++ + + + PT+ L
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQ-NQKASFIAVNADKFSDIAQKNGVYALPTMVL 94
Query: 333 YSKDNQVHDYXGE--RTLAGL 389
+ K ++ G +TL+ L
Sbjct: 95 FRKGQELDRIVGADVKTLSSL 115
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 42.7 bits (96), Expect = 3e-05
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +3
Query: 153 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKL 332
K V+V+F+A WCG CK + P +++ + +D I +D + + + P+ L
Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTY-SDATFIKVDVDQLSEIAAEAGVHAMPSFFL 77
Query: 333 YSKDNQVHDYXG 368
Y ++ + G
Sbjct: 78 YKNGEKIEEIVG 89
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 41.1 bits (92), Expect = 1e-04
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = +3
Query: 165 VEFYAPWCGHCKQLVPIYDKLGEHFEND---DDVIIAKIDATANELEHTKITSFPTIKLY 335
+++Y P CG CK+L P++D + E + + ++D + I + PT+ LY
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLY 106
Query: 336 SKDNQVHD--YXGERTLAGLTKFVETD-GEGAEP-VPSVTEFEEEED 464
V + + + A L FVET +P +PS + +ED
Sbjct: 107 QNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIPSDEDVLTDED 153
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 102 VKVLVAANFDEVVFDTTKKV-LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 278
V++ F E++ + +++ L+ FYAPW CKQ+ ++D+ + +N + KI+A
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKN---AVFLKIEA 59
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.1 bits (77), Expect = 0.006
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 165 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVII-AKIDATANELEHTKITSFPTIKLYSK 341
V+ YA WCG CK + P++ +L + + V +D + + PT +
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 342 DNQV 353
Q+
Sbjct: 84 GKQI 87
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 219 DKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKD-NQVHDYXGERTLAGLTK 395
D+ G + D +I ++ E E + I+ + + VHD TL G+ K
Sbjct: 227 DQHGRIVFDSSDTVIKDLENKDVEAESQEAVVAAPIESHDTEMTNVHDNISRETLNGIYK 286
Query: 396 FVETDGEGAEPVPSVTEFE 452
TD + PS+ FE
Sbjct: 287 CYFTDIDQLTICPSLQGFE 305
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 373 GHWPASPSSLRPTVK 417
G+WP PSS+RP K
Sbjct: 384 GNWPNYPSSIRPLAK 398
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 315 FPTIKLYSKDNQVHDYXGERTLAGLTKFVE 404
FPT+ +Q+++Y GE GL ++E
Sbjct: 526 FPTVYFTKISDQINNYEGELPTDGLKYYIE 555
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 24.6 bits (51), Expect = 9.0
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 30 SFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLV 209
SF D + K+++ D V A +EV + +EF A W GH + +
Sbjct: 952 SFDDASFKENMCVHD-------GKVPTFYADYVNEVKRIIQRNANLEFEAIWKGHSENKI 1004
Query: 210 PIYDKLGEHFEND 248
P Y L H +
Sbjct: 1005 P-YTSLSNHLSTE 1016
>SPCC61.02 |spt3||histone acetyltransferase complex subunit
Spt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 307
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 423 EPVPSVTEFEEEED 464
EPVP EFEE+ D
Sbjct: 133 EPVPETEEFEEDND 146
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 51 KQHLLSEDLPA-DWAAKPVKVLVAANFDEVVFDTTKKVL 164
+ H L DL A W A V +L ANF+ V+F+ +K +
Sbjct: 411 RPHRLKIDLNAKQWGATGVCIL-NANFNLVIFEAGQKAI 448
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,734,686
Number of Sequences: 5004
Number of extensions: 30725
Number of successful extensions: 104
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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