Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314D07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 176 8e-45
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 113 8e-26
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 4e-25
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 95 2e-20
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 75 3e-14
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 5e-11
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 62 2e-10
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 60 1e-09
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 56 2e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 54 7e-08
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 50 2e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 49 2e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 47 8e-06
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 45 3e-05
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.005
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 35 0.047
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 32 0.25
SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30) 31 0.76
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 30 1.3
SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42) 27 7.1
SB_26368| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1) 27 9.4
SB_27236| Best HMM Match : P19Arf_N (HMM E-Value=5.1) 27 9.4
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_53547| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_3954| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 176 bits (429), Expect = 8e-45
Identities = 82/160 (51%), Positives = 110/160 (68%), Gaps = 4/160 (2%)
Frame = +3
Query: 12 IEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCG 191
++EFVQ+F D LK HLLS ++P DW +KPVKVL NFDEV + K V VEFYAPWCG
Sbjct: 356 VKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCG 415
Query: 192 HCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYXGE 371
HCKQL PI+D+LGE +++ D+++AK+D+TANE+E K+ SFPTIK + K+ + DY G
Sbjct: 416 HCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKEGEAVDYNGG 475
Query: 372 RTLAGLTKFVETDGE-GAEPVPSVTEFEEE---EDVPARD 479
RTL KF+E+ G+ G EP E E +D+P +
Sbjct: 476 RTLDDFVKFLESGGKAGNEPAAEGEEPPPEGEGDDLPPEE 515
Score = 81.8 bits (193), Expect = 3e-16
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +3
Query: 102 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEND-DDVIIAKIDA 278
V VL NFDE V K VLVEFYAPWCGHCK L P Y K +++ ++ +AK+DA
Sbjct: 26 VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 279 TANEL--EHTKITSFPTIKLYSKDNQVHDYXGERT 377
TA E ++ +PTIK + KD + +Y G RT
Sbjct: 85 TAETKLGEKFQVQGYPTIKFF-KDGKPSEYAGGRT 118
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 113 bits (272), Expect = 8e-26
Identities = 50/95 (52%), Positives = 70/95 (73%)
Frame = +3
Query: 6 NAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPW 185
++ ++F++ +F G+LK H+ SE LP PVKV+V NF E+V D TK VL+EFYAPW
Sbjct: 833 DSFKQFLEDYFAGSLKPHIKSEPLPESNDG-PVKVVVGENFKEIVNDPTKDVLIEFYAPW 891
Query: 186 CGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 290
CGHCK L P Y++LGE ++ D++IAK+DATAN+
Sbjct: 892 CGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAND 926
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Frame = +3
Query: 159 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT-ANELEHTK--ITSFPTI 326
+LVEF+APWCGHCK+L P Y+ E +ND V +AK+D T A + +K ++ +PT+
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTL 617
Query: 327 KLYSKDNQVHDYXGERTLAGLTKFVETD-GEGAEPVPSVTEFEEEED 464
K++ DY G R +G+ ++++ G + + SV E++ D
Sbjct: 618 KIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLEKKLD 664
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 111 bits (266), Expect = 4e-25
Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 3/136 (2%)
Frame = +3
Query: 6 NAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPW 185
+++ EFV+ F G LK + S+ +P +PV V+V FDE+V D K VL+EFYAPW
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKS-NKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPW 554
Query: 186 CGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT-KITSFPTIKL-YSKDNQ-VH 356
CG L P + KLG+HF ND +++IAKIDATAN++ T + FPTI SKD +
Sbjct: 555 CGIA--LEPTFKKLGKHFRNDKNIVIAKIDATANDVPSTYAVEGFPTIYFATSKDKKNPI 612
Query: 357 DYXGERTLAGLTKFVE 404
+ G R L L KFVE
Sbjct: 613 KFDGGRELKDLIKFVE 628
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 102 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE-NDDDVIIAKIDA 278
V VL + NFD V+ + +LVEFYAPWCGHCK L P Y K + + ND V AK+DA
Sbjct: 63 VSVLNSKNFDRVI-EENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDA 121
Query: 279 T-ANEL-EHTKITSFPTIKLYSKDNQVHDYXGERTLAGLTKFVETDGE 416
T A+++ + ++ +PT+K++ K ++Y G R +G+ ++++ +
Sbjct: 122 TVASDIAQRFDVSGYPTLKIFRKGTP-YEYEGPREESGIVEYMKKQSD 168
Score = 79.0 bits (186), Expect = 2e-15
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 9/136 (6%)
Frame = +3
Query: 84 DWAAKPVKVLVAA--NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDV 257
+W PV L NF EVV + +LVEF+APWCGHCKQL P Y+K + + D
Sbjct: 170 NWKPPPVAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPP 228
Query: 258 I-IAKIDAT-ANEL-EHTKITSFPTIKLYSKDNQVHDYXGERTLAGLTKFVETD-GEGAE 425
I +A +DAT +EL + ++ +PT+K++ K + +Y G+R G+ ++ + G +
Sbjct: 229 IPLAIVDATIESELAQKYEVQGYPTLKVFRK-GKATEYKGQRDQYGIASYMRSQVGPSSR 287
Query: 426 PVPS---VTEFEEEED 464
+ S V +F +E+D
Sbjct: 288 ILSSLKAVQDFMKEKD 303
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 95.5 bits (227), Expect = 2e-20
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
Frame = +3
Query: 111 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATAN- 287
L NFDEVV + K LVEFYAPWCGHCKQL P Y++LGE + DVIIAK+DA +
Sbjct: 27 LTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDR 85
Query: 288 EL-EHTKITSFPTIKLYSKDNQV-HDYXGERTLAGLTKFVE--TDGEGAEPV-PS-VTEF 449
+L + FPTIK + K + +Y G R + KF+E T G PV PS V +
Sbjct: 86 DLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTGVRGRVPVIPSAVADL 145
Query: 450 EE 455
+E
Sbjct: 146 DE 147
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +3
Query: 144 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT--ANELEHTKITSF 317
+ T+ VLV FYAPWCGHCK P Y+K E F++ + + AK+D T + + ++ +
Sbjct: 162 NNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGY 221
Query: 318 PTIKLYSKDNQVHDYXGERTLAGLTKFVETDGEGAEPVPSVTEFEEEED 464
PT++ Y V +Y G+R L F+E E P+ + + ++E++
Sbjct: 222 PTLRYYLYGKFVVEYDGDRVTEDLISFME---EPPLPLSDIPKDQQEKN 267
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = +3
Query: 81 ADWAAKPVKV--LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD- 251
+DW+ KV L + DE + + + VLV ++APWCGHC ++ P Y K + ++D
Sbjct: 43 SDWSKDDSKVVFLTDESHDEFI-KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Query: 252 DVIIAKIDATANE--LEHTKITSFPTIKLYSKDN 347
+ +A +D T ++ + + +PT+KLY N
Sbjct: 102 NCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASN 135
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 64.5 bits (150), Expect = 5e-11
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Frame = +3
Query: 111 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 290
L NF++ V ++ LVEF+APWCGHC++L P + K + V + +DAT +
Sbjct: 84 LTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKG--KVKVGALDATVHT 141
Query: 291 LEHTK--ITSFPTIKLYS----KDNQVHDYXGERTLAGLTKF-VETDGEGAEPVPSVTE 446
+ ++ + +PTIK+++ + V DY G RT + + ++ ++ + EP P V +
Sbjct: 142 VTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEP-PEVIQ 199
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 64.1 bits (149), Expect = 7e-11
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +3
Query: 111 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 290
L A NFD+++ + +LV+FYAPWC HC++L+P + AK+D T
Sbjct: 25 LNAQNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPR 83
Query: 291 ----LEHTKITSFPTIKLYSKDNQVHDYXGERTLAGLTKFVET 407
++ KI +P++KL+ DY G+RT A L ++E+
Sbjct: 84 SKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMES 126
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +3
Query: 123 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE-H 299
+FD++V + + VL+ FY PWCG C P+ + F++ V + +IDA N+L +
Sbjct: 526 SFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQNDLPWN 585
Query: 300 TKITSFPTIKLY---SKDNQV-HDYXGERTLAGLTKFVETDGEGA 422
++S+P+I L+ KD+ + RT L +F+E G A
Sbjct: 586 LTVSSYPSIILFPAGRKDSSIAFPSNTPRTATRLIEFIEEHGSEA 630
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +3
Query: 165 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKD 344
V+FYAPWC HC +L PI+++L E F+++ D+ I+KI+ +PT+ L+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNADITISKIN------------GYPTLMLFKDG 158
Query: 345 NQVHDYXGERTLAGLTKFV 401
Q +Y G R L L +F+
Sbjct: 159 VQKKEYSGNRDLDSLYRFI 177
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Frame = +3
Query: 120 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH--FENDDDVIIAKIDATANEL 293
+NF+ V K VLV+FYAPWC HCK++ P Y + + + + V +AK+D +AN +
Sbjct: 142 SNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNM 200
Query: 294 EHTK------ITSFPTIKLYSKDNQVHDYXG-ERTLAGLTKFVETDGEGAEP 428
K + PTI L+ V ++ G R + FV + A+P
Sbjct: 201 ATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIKGFVMDAVKEADP 252
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 84 DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVI 260
D A+ V L NF+E + + VLV+FYAPWC C++L P++D +N+ +
Sbjct: 47 DPASPAVLNLNDQNFNETI-KKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLR 105
Query: 261 IAKIDATANE 290
AK+ + +E
Sbjct: 106 FAKVIYSIDE 115
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 102 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 281
V L +F V ++ V+F+APWC C +L+P Y K F V +D T
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG-KPVGFGTVDCT 344
Query: 282 A-NELEHT-KITSFPTIKLYSKDNQVHDYXGERTLAGLTKFVETD 410
++L H I S+PT LY+ ++Q H + G + +FVE +
Sbjct: 345 VHSQLCHQYNIRSYPTTILYN-NSQPHQFIGHHNALDIIEFVEVE 388
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 123 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 302
NF V + +V+FYAPWCG C + P Y++L + + +
Sbjct: 442 NFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEA 501
Query: 303 KITSFPTIKLY 335
I S+PT++LY
Sbjct: 502 NIHSYPTVRLY 512
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 54.0 bits (124), Expect = 7e-08
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +3
Query: 123 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHT 302
N DE V D +K V + FYAPW HC++++ I+D++ + F + DD+++ K +A + T
Sbjct: 35 NVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIAT 93
Query: 303 K--ITSFPTIKLYSKDNQVHD-YXG 368
+ I +P + + K + + Y G
Sbjct: 94 RYWIDRYPMFRYFIKGSTTEETYDG 118
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 PVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLV-PIY 218
P+ L +NF+ VV + K VLV +Y C C Q+ P Y
Sbjct: 145 PLIELEKSNFERVVKNRAKDVLVFYYNGNCKLCDQMAYPYY 185
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 120 ANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE 296
A F+ V+ +T K V+++FYA WCG C+Q+ P + K+ E DV AKID +ELE
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA--LEEFKDVFFAKID--VDELE 74
Query: 297 HTKITSFPTIKL 332
K+ +KL
Sbjct: 75 LEKLVGANEVKL 86
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 159 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAK 269
+LVEF+APWCGHCK+L P Y+ E +ND V +AK
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 87 WAAKPVKVLVAAN--FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIY-DKLGEHFENDDDV 257
W+ P +V+ + FD+ V VLV FYAPWCGHCK + P Y D E +
Sbjct: 77 WSDTPSEVVHLRDDMFDDFVAKNPS-VLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPG 135
Query: 258 IIAKIDATANEL--EHTKITSFPT 323
++A +DAT + K+ +PT
Sbjct: 136 VLAAVDATKEAALGKRFKVEGYPT 159
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 DWAAKPVKVLVAANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFEN 245
+W+ P +V ++ F KK VLV FYAPWCGHCK+ P +H ++
Sbjct: 189 EWSEIPSEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 47.2 bits (107), Expect = 8e-06
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +3
Query: 150 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA-TANELEHTK-ITSFPT 323
TK V+ +F A WCG CK + P+Y L E ++ + KID EL + +T+ PT
Sbjct: 27 TKLVVADFTASWCGPCKSIAPVYSGLSEKYK---QAVFLKIDVDVCQELAAKQGVTAMPT 83
Query: 324 IKLYSKDNQVHDYXGERTLAGLTKFVETDGEGAE 425
+ + +V + G A + G+G E
Sbjct: 84 FQFFKNKVKVDEVRGADPKALEDAIKKWIGDGEE 117
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 99 PVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 278
P+ L +FD + D + +LV+FYAPWC C L P Y+K + ++AK
Sbjct: 23 PIFELTDQDFDNFLKDK-EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALM 81
Query: 279 TANELEHT 302
N + T
Sbjct: 82 NTNSTQTT 89
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 150 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL--EHTKITSFPT 323
++ V+++F A WCG CK + P++ L F DV+ K+D +L E I + PT
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTNLSMKFM---DVVFLKVDVDQCQLTAESCGIRAMPT 84
Query: 324 IKLYSKDNQVHDYXG 368
Y ++ + G
Sbjct: 85 FHFYHNKAKIDELRG 99
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +3
Query: 126 FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTK 305
FD+ + D + ++F A WCG C+ + P ++++ + F+ V AK+D N +E +
Sbjct: 4 FDKFLKDN-EVAAIDFTATWCGPCRMIGPKFEEMAKEFKG---VKCAKVDVDVNSVEVLR 59
Query: 306 I 308
+
Sbjct: 60 V 60
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 34.7 bits (76), Expect = 0.047
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 120 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI-YDKLGEHFENDDDVIIAKIDATANELE 296
+ F ++ +L F P+ C +P EHF+ ++A ++ TAN ++
Sbjct: 494 SGFHQIPLSKESTLLTTFITPFGRFCYNRLPFGITSAPEHFQKRMTSVLAGVEGTANMID 553
Query: 297 HTKITSFPTIKLYSKDNQVHDYXGERTLAGL 389
T + Y +D Q HD ER L L
Sbjct: 554 DTLV--------YGRDQQEHDERLERVLKKL 576
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +3
Query: 123 NFDEVVFDTTKKV-LVEFYAPWCGHCKQLVPIYDKLGEHFEN----DDDVIIAKIDATAN 287
+FD ++ ++ + +V F+APW HC Q+ + ++L + + + ++ +ID AN
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDG-AN 69
Query: 288 ELEHTK 305
E TK
Sbjct: 70 APELTK 75
>SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30)
Length = 1084
Score = 30.7 bits (66), Expect = 0.76
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +3
Query: 120 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI-YDKLGEHFENDDDVIIAKIDATANELE 296
+ F ++ +L F P+ +P EHF+ ++A ++ TAN ++
Sbjct: 875 SGFHQIPLSKESTLLTTFITPFGRFSYNRLPFGITSAPEHFQKRMTSVLAGVEGTANMID 934
Query: 297 HTKITSFPTIKLYSKDNQVHDYXGERTLAGL 389
T + Y +D Q HD ER L L
Sbjct: 935 DTLV--------YGRDQQEHDERLERVLKKL 957
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD-DVIIAKIDATANE 290
K + V F A WC C+Q PI E ++ D++I + + +E
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVIIFVSSDRDE 72
>SB_31593| Best HMM Match : Ribonuclease_3 (HMM E-Value=6.30024e-42)
Length = 618
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 378 LAGLTKFVETDGEGAEPVPSVTEFEEEEDVP 470
L T+ V DG ++PV + EFEE +P
Sbjct: 402 LTNRTQRVVVDGVSSKPVDKLVEFEEGSGIP 432
>SB_26368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 222 PTMVEYAYGRARCVEDDMLRI-YQKHFTYFTGP 253
>SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1)
Length = 1463
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 451 PTMVEYAYRRARCVEDDMLRI-YQKHFTYFTGP 482
>SB_27236| Best HMM Match : P19Arf_N (HMM E-Value=5.1)
Length = 395
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 113 PTMVEYAYRRARCVEDDMLRI-YQKHFTYFTGP 144
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 177 APWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 275
A WC CK L P D + E D V +AK+D
Sbjct: 46 ACWCNPCKVLTPRLDAI--IAEQDGKVDLAKVD 76
>SB_53547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1381
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 711 PTMVEYAYRQARCVEDDMLRI-YQKHFTYFTGP 742
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 306 ITSFPTIKLYSKDNQVHDYXGERTLAGLTKFV 401
I +PT+ L+ Q +Y G R L L +F+
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2061
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 1267 PTMVEYAYRRARCVEDDMLRI-YQKHFTYFTGP 1298
>SB_3954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 PRSVEFDEDLLSCVEDDFVKVGGDEHFDGFGGP 87
P VE+ CVEDD +++ +HF F GP
Sbjct: 127 PTMVEYAYRRARCVEDDMLRI-YQKHFTYFTGP 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,678,011
Number of Sequences: 59808
Number of extensions: 247335
Number of successful extensions: 2778
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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