Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D06f
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p pro...    61   8e-10
AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD...    61   8e-10
AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC...    61   8e-10
AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB...    61   8e-10
AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA...    61   8e-10
AE014296-525|ABC66127.1|  317|Drosophila melanogaster CG34025-PA...    28   6.6  

>AY069316-1|AAL39461.1|  303|Drosophila melanogaster LD03052p
           protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +1

Query: 247 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNW--YEFASCYM 411
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW       CY+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYL 169


>AE014298-2564|AAO41692.1|  303|Drosophila melanogaster CG5445-PD,
           isoform D protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +1

Query: 247 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNW--YEFASCYM 411
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW       CY+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYL 169


>AE014298-2563|AAN09441.1|  303|Drosophila melanogaster CG5445-PC,
           isoform C protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +1

Query: 247 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNW--YEFASCYM 411
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW       CY+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYL 169


>AE014298-2562|AAF48724.1|  303|Drosophila melanogaster CG5445-PB,
           isoform B protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +1

Query: 247 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNW--YEFASCYM 411
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW       CY+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYL 169


>AE014298-2561|AAF48723.1|  303|Drosophila melanogaster CG5445-PA,
           isoform A protein.
          Length = 303

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = +1

Query: 247 EIDQNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNW--YEFASCYM 411
           +ID  LL QFSCM TTD E+LI Q Q L+   +N  +A F+L+MSNW       CY+
Sbjct: 113 DIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYL 169


>AE014296-525|ABC66127.1|  317|Drosophila melanogaster CG34025-PA
           protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = +1

Query: 256 QNLLLQFSCMNTTDREELIKQMQKLLGPSLNYNTASFFLDMSNWYEFASCYMLLFRXYIT 435
           + L ++ +C+      ELI QM+ L   S+N   ++    ++N  E  S Y+     YI+
Sbjct: 186 EELWIRGTCLKLRSDYELISQMKSLTKLSINVGGSNCLGPLTNLTELRSLYVESIFSYIS 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,611,715
Number of Sequences: 53049
Number of extensions: 258716
Number of successful extensions: 398
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)