Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D05f
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68003-3|CAA91977.1|  849|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    27   4.4  
AF099919-1|AAC68793.1|  273|Caenorhabditis elegans Hypothetical ...    27   4.4  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    27   5.9  
U21308-12|AAB93315.2|  360|Caenorhabditis elegans Hypothetical p...    27   5.9  
AF068713-6|AAC17797.1|  282|Caenorhabditis elegans Serpentine re...    27   7.8  

>Z68003-3|CAA91977.1|  849|Caenorhabditis elegans Hypothetical
           protein E02H4.4 protein.
          Length = 849

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = -3

Query: 392 IYPHASVRM--LYGWSFKAFPRYDFNGCGIDEWRSFAVLKKYLLYM*TKVEFSMSLRQQT 219
           +Y + +V++  L G +FK FP   F+ C     R F  L  Y   + TK+  + S RQQ 
Sbjct: 562 VYQNNAVKLFLLVGTAFKHFPSVGFHSC-----RQFLSLATY-FSLDTKLLEAPSSRQQQ 615

Query: 218 ASRLKRWSPKDLIGFNVMGHKQS 150
            SR  R S + +  F+V    QS
Sbjct: 616 LSR--RVSHRTINQFSVDSGYQS 636


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
            protein Y59A8B.1a protein.
          Length = 1641

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 139  LSTLDCLCPITLKPIKSLGDQRFSRDAVCWRNDIENS 249
            +ST DC    TL P+KS   QR   D +  + ++E+S
Sbjct: 1047 MSTRDCSVVSTLGPVKSKASQRL-HDIIEGKEELEDS 1082


>AF099919-1|AAC68793.1|  273|Caenorhabditis elegans Hypothetical
           protein F40G9.8 protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 220 VCWRNDIENSTFVYMYSKYFLSTAKDLHS 306
           V W  D+  +T ++  SKYF+ST +++ S
Sbjct: 159 VSWLPDLPVNTRIHEKSKYFISTLRNISS 187


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 391 YIHMHLLGCYMAGL-LRLFHAMTSMAVV 311
           Y H  L+ C++A L L LFH +   A V
Sbjct: 115 YFHFFLISCFLANLRLALFHLVLIFATV 142


>U21308-12|AAB93315.2|  360|Caenorhabditis elegans Hypothetical
           protein ZK1290.9 protein.
          Length = 360

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 323 NGCGIDEWRSFAVLKKYLL 267
           NGC +D+W+S +  KK +L
Sbjct: 143 NGCQVDQWKSSSGYKKIIL 161


>AF068713-6|AAC17797.1|  282|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 67 protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 91  TCVIQCA*CEFLNVLALSTLDCLCPITLKPIKSLGDQRFSRD 216
           T ++ C    FLN   L T+ CL  IT K   SL   RF+ D
Sbjct: 11  TTIVICQINIFLNSSLLFTIFCLKGITSKSDMSLVYSRFAAD 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,433,364
Number of Sequences: 27780
Number of extensions: 180305
Number of successful extensions: 358
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)