Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p pro...    29   2.9  
AE014298-462|AAF45823.2|  333|Drosophila melanogaster CG2715-PA ...    29   2.9  

>AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p
           protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 405 HPNRL*HKNYAKRVDRNLRI--KITNPHGRTQ*LKLLTLNK 521
           H N L  +NY  +V +NLR+  KI N     Q ++LL  NK
Sbjct: 179 HKNELFLQNYETKVKKNLRLHTKIINSEASEQEIELLIENK 219


>AE014298-462|AAF45823.2|  333|Drosophila melanogaster CG2715-PA
           protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 405 HPNRL*HKNYAKRVDRNLRI--KITNPHGRTQ*LKLLTLNK 521
           H N L  +NY  +V +NLR+  KI N     Q ++LL  NK
Sbjct: 179 HKNELFLQNYETKVKKNLRLHTKIINSEASEQEIELLIENK 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,196,816
Number of Sequences: 53049
Number of extensions: 370060
Number of successful extensions: 786
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)