Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314D03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2943| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 32 0.25
SB_26061| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_6833| Best HMM Match : Death (HMM E-Value=9.2) 31 0.44
SB_3153| Best HMM Match : PAN (HMM E-Value=0.0028) 31 0.58
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 31 0.76
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 30 1.0
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 29 2.3
SB_14757| Best HMM Match : DUF468 (HMM E-Value=6.5) 29 2.3
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_57739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_1942| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14262| Best HMM Match : DUF999 (HMM E-Value=1.1) 27 7.1
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 9.4
SB_10841| Best HMM Match : C1_1 (HMM E-Value=3.2) 27 9.4
>SB_2943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
Frame = -2
Query: 520 YTHTHAHTHVYP-------RTRMHIHARTHTY 446
+ THAHTH Y RTR H HARTHT+
Sbjct: 29 HARTHAHTHKYQGGHGSARRTRTHTHARTHTH 60
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHARTHTY 446
T TH + + +P T+MH+H R TY
Sbjct: 510 TQTHKYMYTHPDTQMHVHTRKCTY 533
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHARTH 452
T H T+ +P T+MH+HA H
Sbjct: 411 TQAHKCTYTHPDTQMHVHALRH 432
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 511 THAHTHVYPRTRMHIHARTH 452
T +T+ +P T MH+HA H
Sbjct: 475 TRKYTYTHPDTHMHVHAPRH 494
>SB_26061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 520 YTH--THAHTHVYPRTRMHIHART 455
YTH TH H HV+ RT H+HA +
Sbjct: 11 YTHILTHNHAHVHARTNTHMHANS 34
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = -2
Query: 514 HTHA-----HTHVYPRTRMHIHARTHTY 446
HTHA +TH+ H+HART+T+
Sbjct: 2 HTHASSNRTYTHILTHNHAHVHARTNTH 29
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHAR 458
TH HAH H T MH ++R
Sbjct: 16 THNHAHVHARTNTHMHANSR 35
>SB_6833| Best HMM Match : Death (HMM E-Value=9.2)
Length = 123
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -2
Query: 241 PMVVGMLWEVTDLEVDKVVTTMMSLYVPSRQAL 143
P VV LW+VTD ++D++ T++ ++ +L
Sbjct: 57 PAVVANLWDVTDRDIDRLTATLLKTWLQRDHSL 89
>SB_3153| Best HMM Match : PAN (HMM E-Value=0.0028)
Length = 285
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHARTHTY 446
THT A TH RT HA THTY
Sbjct: 260 THTQARTHA--RTHARTHAHTHTY 281
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 30.7 bits (66), Expect = 0.76
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHT 449
+TH+H+H ++ RT +H H+ H+
Sbjct: 262 HTHSHSHALLFTRTLIHTHSHPHS 285
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 514 HTHAHTHVYPRTRMHIHARTHTY 446
HTH+H H TR IH +H++
Sbjct: 364 HTHSHPHALSFTRTIIHTHSHSH 386
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTH 452
+TH+H H + RT +H H+ +H
Sbjct: 364 HTHSHPHALSFTRTIIHTHSHSH 386
Score = 28.3 bits (60), Expect = 4.1
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHT 449
+TH+++H ++ RT +H H+ H+
Sbjct: 299 HTHSYSHALLFTRTLIHTHSHPHS 322
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTH 452
+TH+ +HT + RT +H H+ +H
Sbjct: 246 HTHSPSHTLSFTRTLIHTHSHSH 268
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHARTH 452
TH+H+H + T +H H+ +H
Sbjct: 332 THSHSHALSFTHTLIHTHSHSH 353
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + +P T + H TH Y
Sbjct: 66 YTHQYTHQYTHPYTHPYTHQYTHQY 90
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + +P T + H TH Y
Sbjct: 171 YTHQYTHPYTHPYTHPYTHQYTHQY 195
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H +P T + H TH Y
Sbjct: 159 YTHQYTHQCTHPYTHQYTHPYTHPY 183
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + +P T + H H Y
Sbjct: 175 YTHPYTHPYTHPYTHQYTHQYPHQY 199
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = -2
Query: 520 YTH--THAHTHVYPRTRMH--IHARTHTY 446
YTH TH +TH YP H H TH Y
Sbjct: 183 YTHPYTHQYTHQYPHQYTHQCTHQYTHQY 211
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 520 YTHTHAHTHVYPR--TRMHIHARTHTY 446
+ +TH +TH YP T + H TH Y
Sbjct: 36 HQYTHQYTHQYPHQYTHQYTHQYTHQY 62
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 50 YTHQYTHQYTHQYTHQYTHQYTHQY 74
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 54 YTHQYTHQYTHQYTHQYTHQYTHPY 78
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 58 YTHQYTHQYTHQYTHQYTHPYTHPY 82
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 123 YTHQYTHQYTHQYTHQYTHQYTHQY 147
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 127 YTHQYTHQYTHQYTHQYTHQYTHQY 151
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 131 YTHQYTHQYTHQYTHQYTHQYTHQY 155
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 135 YTHQYTHQYTHQYTHQYTHQYTHQY 159
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 139 YTHQYTHQYTHQYTHQYTHQYTHQY 163
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = -2
Query: 520 YTH--THAHTHVY--PRTRMHIHARTHTY 446
YTH TH +TH Y P T + H TH Y
Sbjct: 163 YTHQCTHPYTHQYTHPYTHPYTHPYTHQY 191
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 520 YTH--THAHTHVYPRTRMHIHARTHTY 446
YTH TH +TH YP + H TH Y
Sbjct: 6 YTHHYTHQYTHQYP--HQYTHQYTHQY 30
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 42 YTHQYPHQYTHQYTHQYTHQYTHQY 66
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 147 YTHQYTHQYTHQYTHQYTHQCTHPY 171
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTHTY 446
YTH + H + + T + H TH Y
Sbjct: 191 YTHQYPHQYTHQCTHQYTHQYTHQY 215
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 520 YTHTHAHTHVYPRTRMHIHARTH 452
YTH H +P T+M++HA H
Sbjct: 324 YTHQDTQMHKHPDTQMYVHAPRH 346
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 242 SNGGRHAVGGDRPRSGQGGDDDDVL 168
S GGR + GG R G GG+ +DV+
Sbjct: 58 SGGGRSSSGGGGRRGGSGGNKEDVV 82
>SB_14757| Best HMM Match : DUF468 (HMM E-Value=6.5)
Length = 198
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMHIHARTH 452
T H T+ +P T+MH+HA H
Sbjct: 154 TQAHKCTYTHPDTQMHVHAPRH 175
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -2
Query: 520 YTHTH---AHTHVYPRTRMHIHARTHTYE 443
+THTH HTH PR H+H TH +E
Sbjct: 400 HTHTHLHDTHTHETPRHDTHLH-DTHPHE 427
>SB_57739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = -2
Query: 514 HTHAHTHVYPRTRMHIHA--RTHT 449
HT +T+ +P T++H+HA RT+T
Sbjct: 110 HTREYTYTHPDTQIHVHAPRRTNT 133
>SB_27573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 511 THAHTHVYPRTRMHIHARTH 452
T +T+ +P T+MH+HA H
Sbjct: 156 TRKYTYTHPDTKMHVHAPRH 175
>SB_1942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Frame = -2
Query: 517 THTHAHTHVYPRTRMH----IHARTHTY 446
TH + T VYP TR+H +H TH Y
Sbjct: 53 THVYPVTRVYPVTRVHPVTRVHPVTHAY 80
>SB_14262| Best HMM Match : DUF999 (HMM E-Value=1.1)
Length = 505
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 438 AFSYVCVRACICMRVRG 488
AF VC+R C CMR G
Sbjct: 360 AFIVVCIRRCWCMRAEG 376
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 IHTHARTHARIPXXXXXXXXXXXHVRKRAR--ARIHAYARTHIHAYPR 384
IH + R HA+IP + R R HA T IH Y R
Sbjct: 208 IHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTR 255
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 IHTHARTHARIPXXXXXXXXXXXHVRKRAR--ARIHAYARTHIHAYPR 384
IH + R HA+IP + R R HA T IH Y R
Sbjct: 250 IHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTR 297
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 IHTHARTHARIPXXXXXXXXXXXHVRKRAR--ARIHAYARTHIHAYPR 384
IH + R HA+IP + R R HA T IH Y R
Sbjct: 292 IHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTR 339
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 IHTHARTHARIPXXXXXXXXXXXHVRKRAR--ARIHAYARTHIHAYPR 384
IH + R HA+IP + R R HA T IH Y R
Sbjct: 362 IHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTR 409
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 521 IHTHARTHARIPXXXXXXXXXXXHVRKRAR--ARIHAYARTHIHAYPR 384
IH + R HA+IP + R R HA T IH Y R
Sbjct: 404 IHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHAKIPTQIHRYTR 451
>SB_10841| Best HMM Match : C1_1 (HMM E-Value=3.2)
Length = 544
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 444 SYVCVRACICMRVRGYTCVCACV 512
S VC+ CI RV Y C+ C+
Sbjct: 508 STVCITECIQWRVIIYNCITGCI 530
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,963,900
Number of Sequences: 59808
Number of extensions: 242379
Number of successful extensions: 1071
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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