Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UBB9 Cluster: Putative uncharacterized protein; n=1; ...    35   0.98 
UniRef50_Q09405 Cluster: Putative uncharacterized protein; n=2; ...    34   2.3  
UniRef50_Q23MA4 Cluster: TPR Domain containing protein; n=1; Tet...    33   4.0  

>UniRef50_Q4UBB9 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 878

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +3

Query: 93  FVIRKLYSPCCLW*CKIIIY*SLKFKSFHIESSITSQNTS--HASHIKKNYCLLFMIVSD 266
           F +R +Y P CL   K  IY  +   +F ++S +T +NT   + ++ ++    +F+ +S 
Sbjct: 470 FEVRSIYFPFCLLKNKFTIYKPISLSNFTVDSEVTQKNTREYYLTYNQEFVFAVFVPIST 529

Query: 267 LLMIVVKPTCHSHI 308
           ++++        HI
Sbjct: 530 IVLVKFSVETFFHI 543


>UniRef50_Q09405 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 375

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 22/78 (28%), Positives = 40/78 (51%)
 Frame = -1

Query: 239 IVFFNVGGM*CILRCNAAFYMKRLKFKTSVNNYFTLPEATRAIQFSYYKNMRSLLFIFYI 60
           +VF +VG + C++     FYMK +K+    N    +PE +R     + K++  LL +  I
Sbjct: 16  LVFGHVG-LSCVVLLLVTFYMKSVKYLPKYN--IVIPEESRMTTILWAKSLFLLLSLVTI 72

Query: 59  F**YRLNMLLNPRAEFGT 6
           +  +R   + +P+  F T
Sbjct: 73  YFPFRKVCMKHPKGVFTT 90


>UniRef50_Q23MA4 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1830

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = -1

Query: 485 YDLDGHFKNSFHGILVILLFFSYINNYESKAVFF*YEPHMISNVYENILTLVINE 321
           Y++  HFKNS   +   L FFS    Y  K     Y P  +  VYE I+ L   E
Sbjct: 180 YEIIAHFKNSTLALFYQLKFFSTNQGYVKK-----YMPRFLQQVYETIVYLYYPE 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,722,136
Number of Sequences: 1657284
Number of extensions: 7928667
Number of successful extensions: 14102
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14100
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)