Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D01f
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   5.4  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
 Frame = +2

Query: 101 LILFS---HLVFTDYYLAVQ 151
           LILFS   HLV T YYL ++
Sbjct: 273 LILFSCLLHLVVTPYYLLIE 292


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 160 YFYETVERLFPEESASFPLAKK 225
           YFY  +   +P E A   LA+K
Sbjct: 248 YFYSHLSNPYPSEEAKEELARK 269


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 295 QIEPKNIEKMLALT 254
           Q+EP N+ +M+ LT
Sbjct: 177 QLEPANVPQMITLT 190


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 295 QIEPKNIEKMLALT 254
           Q+EP N+ +M+ LT
Sbjct: 184 QLEPANVPQMITLT 197


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 34  FGCVVGTAGSLASQ 75
           FGC+VGT  +L  Q
Sbjct: 66  FGCLVGTPETLRCQ 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,264
Number of Sequences: 336
Number of extensions: 2198
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)