Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314D01f
         (452 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical pr...    36   0.018
Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical pr...    32   0.22 
U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U28992-3|AAA68391.1|  233|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical ...    27   6.4  
AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical
           protein T18D3.9 protein.
          Length = 181

 Score = 35.5 bits (78), Expect = 0.018
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +1

Query: 205 SFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFALYLPVLEANWKWLTLF 384
           S  L KKL +++L F+P   A  L++L   + ++   +   L   +  +   + K     
Sbjct: 79  SLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKSWDLLKEDWFNIYATSLKVWPFV 138

Query: 385 QVINLAFIPPMLRV 426
           QV+NL F+P   RV
Sbjct: 139 QVVNLCFVPLNYRV 152


>Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical
           protein T16G12.6 protein.
          Length = 930

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = +1

Query: 184 LFPEES--ASFPLAKKLLLE--RLIFAPLMQAFSLYSLARFEGKTHRAALKQLFALYLPV 351
           LF  ES  A+  LAK  +L+   L+   +  AF+ + LA FE       + +   L   V
Sbjct: 719 LFVTESVIAACALAKSTVLQCGSLVGVDMANAFAQWILA-FEQHVESPQVDEYLQLIYQV 777

Query: 352 LEANWKWLTLFQVINLAFIPPMLRVC 429
           +  NWK +  F   ++A     L++C
Sbjct: 778 VRKNWKMIRKFPDPSMAAFQSSLKIC 803


>U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical
           protein R13A1.3 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 77  SWLENQSDLILFSHLVFTDYYLAVQFLTISMKQLKGCFLKNL 202
           S++EN   L +F  L F+ Y+L+  FL  S+     C + NL
Sbjct: 295 SYIENAVSLGIFCPLSFSFYFLSYAFLQTSLIACSKCSIFNL 336


>U28992-3|AAA68391.1|  233|Caenorhabditis elegans Hypothetical
           protein T05C1.3 protein.
          Length = 233

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 316 RLYEFFLQIEPKNIEKMLALTVQRSNV 236
           R+Y +FL +E  ++EK+L   V RS +
Sbjct: 128 RVYIYFLDVEMADVEKLLRFNVDRSTI 154


>Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical
           protein T16G1.9 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 281 EYRENACINGAKIKRSNNNFFASGNDADSSGNSLS 177
           +++++   NG     +  N  ASG+ + S+GNS+S
Sbjct: 402 QHKQSGVSNGVSNSSNGTNGHASGDHSHSNGNSVS 436


>AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical
           protein F41B5.6 protein.
          Length = 598

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +1

Query: 190 PEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFALY 342
           P  +A++P+A+KLL ER     +++   L  L   +   +  +L+Q+  L+
Sbjct: 189 PLTAANYPVARKLLKERFDNTTILRHLLLRKLQEIQPVPNNHSLQQIQQLW 239


>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 125 FTDYY--LAVQFLTISMKQLKGCFLKNLHHSHLQK 223
           F D Y  LA+ F+  + K  KGC    LH + L K
Sbjct: 151 FCDRYADLALMFVYNNFKNCKGCVSDQLHSTELDK 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,274,005
Number of Sequences: 27780
Number of extensions: 191737
Number of successful extensions: 482
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)