Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C12f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48477| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)                    28   4.1  
SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)                   27   7.1  
SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)                   27   7.1  
SB_24170| Best HMM Match : rve (HMM E-Value=0.61)                      27   9.4  
SB_48479| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_48477| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 459 SLTIVYLCVFLLKYSSSCHDVIPY 388
           +L IVY+ +  L+YS+SC +++ Y
Sbjct: 506 NLNIVYMALLFLQYSNSCINIVVY 529


>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
          Length = 461

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -1

Query: 200 GYSVISI*VKTKNAAKKLQNYLLHKLTKRTSQY*FNFTELSHNNSLCTTVNIENNVLKQK 21
           G   ++I  KT    KK+   LLHKL K+        ++L     L + ++IE NV K K
Sbjct: 205 GVQTVTIDHKTMKIIKKIPKSLLHKLLKK--------SKLDKYLKLASFLSIEGNVKKMK 256


>SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 146 QNYLLHKLTKRTSQY*FNFTELSHNNSLCTTVNIENNVLKQKVRV 12
           ++Y+    TK    +    TEL H  +LC    IE+++++ ++ V
Sbjct: 96  ESYIFQTTTKDDRPFDVFLTELRHKATLCEFGEIEDSLIRDQIVV 140


>SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 146 QNYLLHKLTKRTSQY*FNFTELSHNNSLCTTVNIENNVLKQKVRV 12
           ++Y+    TK    +    TEL H  +LC    IE+++++ ++ V
Sbjct: 96  ESYIFQTTTKDDRPFDVFLTELRHKATLCEFGEIEDSLIRDQIVV 140


>SB_24170| Best HMM Match : rve (HMM E-Value=0.61)
          Length = 768

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 146 QNYLLHKLTKRTSQY*FNFTELSHNNSLCTTVNIENNVLKQKV 18
           ++Y+    TK    +    TEL H  +LC    IE+++++ ++
Sbjct: 96  ESYIFQTTTKDDRPFDVFLTELRHKATLCEFGEIEDSLIRDQI 138


>SB_48479| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -3

Query: 459 SLTIVYLCVFLLKYSSSCHDVI 394
           +L IVY+ +  L+YS+SC +++
Sbjct: 249 NLNIVYMALLFLQYSNSCINIV 270


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,391,878
Number of Sequences: 59808
Number of extensions: 195421
Number of successful extensions: 415
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)