Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C11f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g52730.1 68418.m06545 heavy-metal-associated domain-containin...    29   1.9  
At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein si...    29   1.9  
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890...    28   3.3  
At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF...    28   4.4  
At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containi...    27   5.8  
At2g32860.1 68415.m04028 glycosyl hydrolase family 1 protein           27   5.8  
At2g29060.1 68415.m03532 scarecrow transcription factor family p...    27   5.8  
At4g23310.1 68417.m03359 receptor-like protein kinase, putative ...    27   7.7  
At4g21960.1 68417.m03178 peroxidase 42 (PER42) (P42) (PRXR1) ide...    27   7.7  

>At5g52730.1 68418.m06545 heavy-metal-associated domain-containing
           protein  contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 185

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 418 SSRVSWKFIPLWENNKVYFKIENTERKQNLALKV 519
           SS   + F+ + +N  V FK+E  ERK+  A+K+
Sbjct: 28  SSYKLFHFLKMQQNTNVVFKLEVDERKKKKAMKI 61


>At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein
           similar to leucine zipper protein GI:10177020 from
           [Arabidopsis thaliana] contains Pfam domain PF03081:
           Exo70 exocyst complex subunit;
          Length = 599

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 114 VIVKMLRQDFVEGCAFVGVQRRREETQDNNSGLHLR 7
           + V+M+   F + C+ V   RRRE  +++ S LHLR
Sbjct: 192 IAVRMVAGGFAKECSRVYSSRRREFLEESLSRLHLR 227


>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 509

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 10  KMKSAVVVLCLFAASLYAD-EGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGEL 186
           K K+   +LC+   +++   +      +  +++ ++++  DYD+ V+ S LI  +    +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457

Query: 187 ITNVVN 204
           +TN V+
Sbjct: 458 LTNGVD 463


>At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF)
           identical to alpha-glucosidase I (GI:16506680,
           GI:13398928) [Arabidopsis thaliana]
          Length = 852

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 145 ERSKLIYTDNKGELITNVVNN 207
           E+SK IYT+ +  LI NVV N
Sbjct: 790 EKSKAIYTELRSNLIRNVVRN 810


>At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 473

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 181 ELITNVVNNLIRNNKMNCMEYAYQLWMQGSEDIVRDCF 294
           E++  ++ NL  +NK  C + AY+ ++   E   ++CF
Sbjct: 111 EVLVGILRNLSYDNKARCAKLAYRFFLWSGE---QECF 145


>At2g32860.1 68415.m04028 glycosyl hydrolase family 1 protein 
          Length = 613

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 161 STPITRVSSSQMS*TI*YETTR*TAWSTPTSSGCKAPRTSSGIV 292
           STP+ +V+SSQ++    YET     W+   ++      TS GIV
Sbjct: 413 STPLAKVNSSQLN----YETDLRVNWTDSQNNSPHLKTTSMGIV 452


>At2g29060.1 68415.m03532 scarecrow transcription factor family
           protein 
          Length = 1336

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 358 LAFTLSDNGGVAYGDSKDRTSSRVSWKFIPLWENNK 465
           LA  +S  GG +Y  S   TSS   W F  L ENN+
Sbjct: 116 LAQLVSSPGGSSYASSTTTTSSDSQWSFDCL-ENNR 150


>At4g23310.1 68417.m03359 receptor-like protein kinase, putative
           similar to receptor-like protein kinase 4 (gi:13506745),
           5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis
           thaliana; contains Pfam protein kinase domain PF00069
          Length = 830

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 295 PVEFTLILAENYVKLMYRRDGLAFTLSDNGGVAYGDSKDRTSS-RVSWKFIPLWENNKVY 471
           P+E  + L  +   L Y    +  T + NGG+   +S++ TS+ +  +K + L   N+  
Sbjct: 223 PIEKEVTLYYDQCTLRYSNRNILSTSNTNGGIILANSQNMTSNEQARFKDLVLTTMNQAT 282

Query: 472 FKIENTERK 498
               N+ ++
Sbjct: 283 IAAANSSKR 291


>At4g21960.1 68417.m03178 peroxidase 42 (PER42) (P42) (PRXR1)
           identical to SP|Q9SB81 Peroxidase 42 precursor (EC
           1.11.1.7) (Atperox P42) (PRXR1) (ATP1a/ATP1b)
           {Arabidopsis thaliana}
          Length = 330

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 25  VVVLCLFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNK 177
           V +LCL+A S  ++  T     L  + Y D      D   E+ KL+Y  +K
Sbjct: 9   VAILCLWALSATSEAVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHK 59


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,931,956
Number of Sequences: 28952
Number of extensions: 185564
Number of successful extensions: 496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)