Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.41 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.94 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.94 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   0.94 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   2.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   2.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 18/72 (25%), Positives = 28/72 (38%)
 Frame = +2

Query: 89  IFLDYFICF*FHVSLSQCWSYYKLILTVFIYFMNTRCYYYNTYLLISSSA*TLLRFVSFR 268
           +F   FI F  H  L   + YY  I+ + +Y+       +  +LL        +  V   
Sbjct: 84  LFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFV--VPLF 141

Query: 269 LLPC*LYFYILY 304
            L C  YFY  +
Sbjct: 142 FLLCIYYFYCAF 153



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
 Frame = +2

Query: 65  LIIVKLIQIFLDYFICF*FH--------VSLSQCWSYYKLILTVFIYFMNTRCYYYNTYL 220
           L+ +  I  F   FI F  H        + L   + YY  IL   ++ +   C YY  Y+
Sbjct: 206 LLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFT-VHLLLLVCIYYFYYM 264

Query: 221 LISSSA*TLLRFVSFRLLPC*LYFY 295
            +      ++  +    L C  YFY
Sbjct: 265 HLLFCCAFIIFTMHLLFLLCIYYFY 289


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/77 (18%), Positives = 35/77 (45%)
 Frame = +3

Query: 261 VFVYCHVNYIFIFFIEKNKSQHINKQKLSYQYFSSSSLGFEVLFPFTSPRHINLNNRIFS 440
           VF++C    I I  ++     ++NK K      +  ++ +       +  +++L   +F 
Sbjct: 89  VFIFCSAP-IIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERND-YVSLLQLVFV 146

Query: 441 YILIVW*VSVYYTYFFI 491
           +   ++  +VYY Y+ +
Sbjct: 147 FCYFIYLFTVYYIYYSV 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 225  YHPVLKLYCAS*VFVYCHVNYIFI 296
            Y   L + CA+ VF  CHV Y  I
Sbjct: 997  YISFLGIICAADVFYICHVCYATI 1020


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 225 YHPVLKLYCAS*VFVYCHVNYIFI 296
           Y   L + CA+ VF  CHV Y  I
Sbjct: 278 YISFLGIICAADVFYICHVCYATI 301


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 146 TSIG*GKRGIRNK*SNQEKSESTSQLSMHNFN*QIETISNSQ 21
           +S+  GKR  R+K  N + +  TSQ+   N + +     NS+
Sbjct: 69  SSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSK 110


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 140 CWSYYKLILTVFIYFMNTRCYYYN 211
           C + YKL LT  +YF     ++Y+
Sbjct: 265 CLTMYKLSLTEDLYFAIYEMHWYD 288


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 295 YSLLRRIKANISINRNLAINTFRVLHLALKF 387
           Y+LL     N+S+++  A++T  +L L+L F
Sbjct: 445 YTLLHLNLDNVSLSQVPALSTPNLLSLSLAF 475


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 234 VLKLYCAS*VFVYCHVNYIFIFFI 305
           +LKL     VF+   V Y+ IFFI
Sbjct: 4   ILKLSLKDIVFINPLVKYLNIFFI 27


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 428 IIQINVSRRSERKQNFKAK*RTRKVLIAKFLFIDMLAFIL 309
           + Q  +   +E     K +  TRK  I K   +DM  F+L
Sbjct: 179 VAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGEFLL 218


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 428 IIQINVSRRSERKQNFKAK*RTRKVLIAKFLFIDMLAFIL 309
           + Q  +   +E     K +  TRK  I K   +DM  F+L
Sbjct: 179 VAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGEFLL 218


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 318 SQHINKQKLSYQYFSSSSLGFEVL 389
           + HI +Q+L Y Y +  +    VL
Sbjct: 52  NHHIQQQQLQYGYHNHQNYNSNVL 75


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 318 SQHINKQKLSYQYFSSSSLGFEVL 389
           + HI +Q+L Y Y +  +    VL
Sbjct: 52  NHHIQQQQLQYGYHNHQNYNSNVL 75


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 318 SQHINKQKLSYQYFSSSSLGFEVL 389
           + HI +Q+L Y Y +  +    VL
Sbjct: 52  NHHIQQQQLQYGYHNHQNYNSNVL 75


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 318 SQHINKQKLSYQYFSSSSLGFEVL 389
           + HI +Q+L Y Y +  +    VL
Sbjct: 52  NHHIQQQQLQYGYHNHQNYNSNVL 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,602
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)