Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 193 LMTTINKSTHHGKLFPMKDELN 258
           L++TIN+     +L PM+   N
Sbjct: 530 LLSTINRHLRGNELLPMQQSQN 551


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 312 IYAKYVVTCSNMNIMKDSCLLTFYKLHNLI 401
           IY+K+     + N+  D   L F   +NL+
Sbjct: 16  IYSKHYSYWQSKNVPTDKPFLFFGSFYNLV 45


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 1   IGKRNLKSKIEKNEASSSQY*ETCKTIYLNRLI 99
           IG   L+  I++N   SSQ         LNRL+
Sbjct: 787 IGSNGLQCYIDRNVVFSSQNNTNWVPTSLNRLL 819


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,550
Number of Sequences: 336
Number of extensions: 2099
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)