Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6JCT4 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    35   1.3  
UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY0423...    33   4.0  
UniRef50_A7HNE9 Cluster: Zn-dependent protease with chaperone fu...    32   6.9  
UniRef50_A2QK81 Cluster: Contig An04c0360, complete genome; n=4;...    32   9.2  

>UniRef50_Q6JCT4 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=1; Aleurodicus dugesii|Rep: NADH-ubiquinone
           oxidoreductase chain 2 - Aleurodicus dugesii (Doogie
           Howzer whitefly)
          Length = 318

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 182 VYLYILKSLYRTFNFFFIVAYKI-WQRCMVNGYDYPLFFCFSIFYIVFM 39
           +YLYI    Y    F FI +YKI W   ++N Y Y +FF +  F+  F+
Sbjct: 270 IYLYIQFFFY----FMFIYSYKIKWTYLIMNWYLYNIFFFYVYFFCFFI 314


>UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY04239;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04239 - Plasmodium yoelii yoelii
          Length = 1192

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 182 VYLYILKSLYR-TFNFFFIVAYKIWQRCMVNGYDYPLFFCFSIFYIVFMILNNKYFVLEK 6
           V L+  K +Y  ++N  +I    +  R + N Y+Y +    ++ YI+++IL N Y  ++ 
Sbjct: 244 VLLFNYKFIYTLSYNIHYIYKNYVENRQLENDYNYIINIVNNLSYIIYIILYNIYVTIKN 303

Query: 5   K 3
           K
Sbjct: 304 K 304


>UniRef50_A7HNE9 Cluster: Zn-dependent protease with chaperone
           function-like protein; n=1; Fervidobacterium nodosum
           Rt17-B1|Rep: Zn-dependent protease with chaperone
           function-like protein - Fervidobacterium nodosum Rt17-B1
          Length = 327

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -1

Query: 182 VYLYILKSLYRTFNFFFIVAYKIWQRCMVNGYDYPLFFCFSIFYIVFMILNNKYFVLE 9
           V  YI+ S++  F   F V   IW +   N +   LFF FS+F I+F +     F+++
Sbjct: 18  VSTYIILSMFIIFAMLFGVLLDIWLK--TNVFFTILFFIFSVFQILFGLSLTGSFIIK 73


>UniRef50_A2QK81 Cluster: Contig An04c0360, complete genome; n=4;
           Pezizomycotina|Rep: Contig An04c0360, complete genome -
           Aspergillus niger
          Length = 242

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = -1

Query: 143 NFFFIVAYKI-----WQRCMVNGYDYPLFFCFSIFY 51
           NFFFI A+ +     W+  + NG+ Y +F  F +FY
Sbjct: 73  NFFFIAAFGLVITAQWELSVGNGFAYTVFSAFGLFY 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,379,249
Number of Sequences: 1657284
Number of extensions: 5063264
Number of successful extensions: 9891
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9883
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)