Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C02f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12486| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2.9)             27   7.1  
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)                 27   9.4  

>SB_12486| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2.9)
          Length = 492

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 11/42 (26%)
 Frame = -1

Query: 146 FNFFFIVAYKIWQRCM------VNGYDYPLFF-----CFSIF 54
           F +F+ V + ++ RC       V  YDYP+FF     CFS++
Sbjct: 199 FRYFYPVFFAMFTRCFSLCFPGVYRYDYPVFFAIFTRCFSLY 240


>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
          Length = 579

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 104 CMVNGYDYPLFFCFSIFYIVFMILNNKY 21
           C  NG+   LFFC SIF +  + L +KY
Sbjct: 354 CHANGFLNNLFFCASIFTLALIAL-HKY 380


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,680,092
Number of Sequences: 59808
Number of extensions: 158079
Number of successful extensions: 319
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)