Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   2.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   5.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 479 HVSLIKIIKTNIPFPVLTLLNIL 411
           +V  I   KTN+ F  L +LNIL
Sbjct: 236 NVDTIMYEKTNVTFVHLAVLNIL 258


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +3

Query: 264 YQRMKHRM---KSTFFFSNRKTDAPFF 335
           Y+ + H M   K+T FF NR    P F
Sbjct: 173 YETVAHGMTVQKTTLFFFNRTFGVPIF 199


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 200 LKIGLINTPYSYCMIPFRFVI 138
           L +G +   +  C+IPFR  I
Sbjct: 290 LMLGTVVLSFFLCLIPFRVFI 310


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 70  EPTTVIVRAVCPPLSIPKRTVSRITN 147
           +PT  ++++  P    P+RT   +TN
Sbjct: 38  QPTKTVIQSKRPLAPAPERTSVLVTN 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,610
Number of Sequences: 336
Number of extensions: 2078
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)