Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314C01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067521-1|AAH67521.1|  511|Homo sapiens GRHL1 protein protein.        29   7.5  
BC067520-1|AAH67520.1|  618|Homo sapiens grainyhead-like 1 (Dros...    29   7.5  
BC067519-1|AAH67519.1|  618|Homo sapiens grainyhead-like 1 (Dros...    29   7.5  
AF198489-1|AAF32276.1|  618|Homo sapiens LBP-32 protein.               29   7.5  
AC010969-2|AAX93273.1|  618|Homo sapiens unknown protein.              29   7.5  

>BC067521-1|AAH67521.1|  511|Homo sapiens GRHL1 protein protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 158 IPFRFVIRETVRLGIERGGH-TARTITVVGSRHLTTSLNLYTQ-QPHG 21
           +PF  V+    +LGI++ GH TA   TV  S     + ++ T+ QPHG
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHG 165


>BC067520-1|AAH67520.1|  618|Homo sapiens grainyhead-like 1
           (Drosophila) protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 158 IPFRFVIRETVRLGIERGGH-TARTITVVGSRHLTTSLNLYTQ-QPHG 21
           +PF  V+    +LGI++ GH TA   TV  S     + ++ T+ QPHG
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHG 165


>BC067519-1|AAH67519.1|  618|Homo sapiens grainyhead-like 1
           (Drosophila) protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 158 IPFRFVIRETVRLGIERGGH-TARTITVVGSRHLTTSLNLYTQ-QPHG 21
           +PF  V+    +LGI++ GH TA   TV  S     + ++ T+ QPHG
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHG 165


>AF198489-1|AAF32276.1|  618|Homo sapiens LBP-32 protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 158 IPFRFVIRETVRLGIERGGH-TARTITVVGSRHLTTSLNLYTQ-QPHG 21
           +PF  V+    +LGI++ GH TA   TV  S     + ++ T+ QPHG
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHG 165


>AC010969-2|AAX93273.1|  618|Homo sapiens unknown protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 158 IPFRFVIRETVRLGIERGGH-TARTITVVGSRHLTTSLNLYTQ-QPHG 21
           +PF  V+    +LGI++ GH TA   TV  S     + ++ T+ QPHG
Sbjct: 118 VPFNIVLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHG 165


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,604,516
Number of Sequences: 237096
Number of extensions: 1230426
Number of successful extensions: 2580
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2579
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)