Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B12f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g21030.1 68418.m02501 PAZ domain-containing protein / piwi do...    30   1.1  
At3g42820.1 68416.m04484 hypothetical protein hypothetical prote...    27   7.7  
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha...    27   7.7  

>At5g21030.1 68418.m02501 PAZ domain-containing protein / piwi
           domain-containing protein similar to SP|O04379 Argonaute
           protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
           protein (ZWILLE protein) {Arabidopsis thaliana};
           contains Pfam profiles PF02171: Piwi domain, PF02170:
           PAZ domain
          Length = 850

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
 Frame = -3

Query: 339 TSPSQGNSSHKYPTSTRLRKPHTLLVLAPDRVPLNKVSVYLY*LLNECKFMINESKTLQD 160
           T+PS+ N+  +     + +K +  ++ AP  +P+  ++  L     + K +++  + +  
Sbjct: 124 TAPSRRNADKRLKLPHQSKKFNVAILFAPPEIPMEAIANALQ--GKKTKHLLDAIRVM-- 179

Query: 159 NCSLGANVLNQ-CLLKKKGFLLSNGGGNKKVGE 64
           +C L  N   Q CLL ++ F  ++      +GE
Sbjct: 180 DCILSQNAARQGCLLVRQSFFHNDAKYFANIGE 212


>At3g42820.1 68416.m04484 hypothetical protein hypothetical proteins
           - Arabidopsis thaliana
          Length = 906

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -2

Query: 514 SSSCVPLRLRSRVCRWRANATARPRQDI--GSIDVRPHGD 401
           SS  V +   SR+ +  AN T+RP++D+  G+  V P  D
Sbjct: 311 SSGVVSMESISRISKDPANGTSRPKKDVPDGTRGVSPSKD 350


>At2g17930.1 68415.m02076 FAT domain-containing protein /
           phosphatidylinositol 3- and 4-kinase family protein
           contains Pfam profiles PF02259 FAT domain, PF00454
           Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
           domain
          Length = 3795

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +3

Query: 294 CWLGIYVMSSPGLEMSLEHGLPVLMKKTQMSGDRAGSPCGLTSILPMSCRGRA 452
           C  G    +    E  L+H +PV+M+    +      P G   +L    RG A
Sbjct: 581 CIFGAVTKTPSDFERILQHHVPVIMEVCMKNATEVEKPLGYMQLLRTVFRGLA 633


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,008,975
Number of Sequences: 28952
Number of extensions: 252737
Number of successful extensions: 562
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)