Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B11f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CKL0 Cluster: Serine/threonine-protein kinase Nek1; n...    35   1.3  
UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, wh...    34   1.7  
UniRef50_Q8IC23 Cluster: Putative uncharacterized protein PF07_0...    33   4.0  
UniRef50_A0DLH0 Cluster: Chromosome undetermined scaffold_55, wh...    33   4.0  

>UniRef50_Q5CKL0 Cluster: Serine/threonine-protein kinase Nek1; n=2;
           Cryptosporidium|Rep: Serine/threonine-protein kinase
           Nek1 - Cryptosporidium hominis
          Length = 533

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -1

Query: 512 KTW*NSQYCLKQ*RKFHFNLRNKKCFINLSNIPNKLKKVVNSFCVYVKYFLKQ 354
           K W       K+   F++N  NKK  IN+S IP  +K+ V++     K+FLKQ
Sbjct: 301 KHWSQFNSICKELSTFNYNSVNKKNHINISRIPFWIKQDVDTENKSSKFFLKQ 353


>UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_81,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 928

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +3

Query: 66  SHKYEYTNKCFKSK*TILIIFNKLNVHVDRILVSNDSLNIFQCTYKKSKY*RQLL*QF-N 242
           SH Y    K F  + T++   N+L  H D  + SND++   +C +K+ K    LL Q  N
Sbjct: 54  SHYYGEIKKLFSDQPTVIDNVNRLFYH-DARIKSNDTIQQLECLFKQDKQRINLLEQTKN 112

Query: 243 MKYLGTLSSKNKPDTL 290
           +   G L  + + D +
Sbjct: 113 LILKGNLDQQQQLDLI 128


>UniRef50_Q8IC23 Cluster: Putative uncharacterized protein
           PF07_0018; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF07_0018 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1337

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 458 NLRN-KKCFINLSNIPNKLKKVVNSFCVYVKYFLKQC 351
           NLRN +KC        N L K VN F  Y+KYF++ C
Sbjct: 654 NLRNGEKCSSTCVRKENYLLKQVNKFYKYLKYFIEAC 690


>UniRef50_A0DLH0 Cluster: Chromosome undetermined scaffold_55, whole
            genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
            undetermined scaffold_55, whole genome shotgun sequence -
            Paramecium tetraurelia
          Length = 4153

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 29/116 (25%), Positives = 54/116 (46%)
 Frame = +3

Query: 75   YEYTNKCFKSK*TILIIFNKLNVHVDRILVSNDSLNIFQCTYKKSKY*RQLL*QFNMKYL 254
            Y++ N+ F +   +  IFNKL V    +  SN+  ++   T   S    QL   F+ + +
Sbjct: 2648 YDFFNQIFSADQLVQFIFNKLQVDGCLLNYSNEISSLINKTVTFSVDHSQLQFIFSGEIM 2707

Query: 255  GTLSSKNKPDTLIQQVYII*QYVNT*NYFSTSTLF*KVFYINTKTVNNFFKFIWYI 422
              +S KN  +T +++   I   +N    + T+ L+    Y+    +N  F  ++YI
Sbjct: 2708 RVMSIKNN-ETRLKEFESIWYILNKLYCYFTTDLY---RYLENSFINEKFNTMFYI 2759


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,410,421
Number of Sequences: 1657284
Number of extensions: 7004887
Number of successful extensions: 16627
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16627
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)