Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 379 KPKKRLRSTIANCMYMYIL 435
           K K R +   + CMYMY L
Sbjct: 114 KKKIRAKKRWSQCMYMYFL 132


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 379 KPKKRLRSTIANCMYMYIL 435
           K K R +   + CMYMY L
Sbjct: 428 KKKIRAKKRWSQCMYMYFL 446


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 379 KPKKRLRSTIANCMYMYIL 435
           K K R +   + CMYMY L
Sbjct: 661 KKKIRAKKRWSQCMYMYFL 679


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 379 KPKKRLRSTIANCMYMYIL 435
           K K R +   + CMYMY L
Sbjct: 661 KKKIRAKKRWSQCMYMYFL 679


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 500 WSRNGRSYVSNRIRYEFLSG 441
           W R+GR    NR +  F++G
Sbjct: 544 WERDGRQLPINRKQKVFING 563


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 45  LLMIIKQLICMFGAYYAFVCI 107
           ++  +  L+C +  YYAF+ +
Sbjct: 90  IIFTVHFLLCTYYFYYAFIIL 110



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 66  LICMFGAYYAFV 101
           L+C++  YYAF+
Sbjct: 110 LLCVYYFYYAFI 121



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 66  LICMFGAYYAFV 101
           L+C++  YYAF+
Sbjct: 235 LLCIYYFYYAFI 246


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 196 VVGCVLL*YESNLLIITLASIVYCFW 119
           +V   LL Y S  L+      V C+W
Sbjct: 5   LVASFLLVYFSGALVSATTDKVVCYW 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,106
Number of Sequences: 336
Number of extensions: 2248
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)