SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Z5X3 Cluster: EIF3S6IP protein; n=5; Eutheria|Rep: EI...   155   4e-37
UniRef50_Q9Y262 Cluster: Eukaryotic translation initiation facto...   155   4e-37
UniRef50_Q0DJU1 Cluster: Os05g0227700 protein; n=12; Magnoliophy...   101   8e-21
UniRef50_Q95QW0 Cluster: Putative uncharacterized protein; n=3; ...    95   1e-18
UniRef50_Q2U041 Cluster: RNA polymerase I-associated factor - PA...    86   5e-16
UniRef50_Q6CAE9 Cluster: Similar to tr|Q91YE4 Mus musculus 67 kD...    85   9e-16
UniRef50_Q4PF85 Cluster: Putative uncharacterized protein; n=1; ...    79   8e-14
UniRef50_Q86LA2 Cluster: Similar to Xenopus laevis (African claw...    76   6e-13
UniRef50_Q5D9V6 Cluster: SJCHGC08963 protein; n=2; Schistosoma j...    65   8e-10
UniRef50_A7T6P9 Cluster: Predicted protein; n=1; Nematostella ve...    61   1e-08
UniRef50_A4S558 Cluster: Predicted protein; n=2; Ostreococcus|Re...    58   1e-07
UniRef50_Q5K8M2 Cluster: Eukaryotic translation initiation facto...    57   2e-07
UniRef50_Q6LFE7 Cluster: Homologue of human HSPC025; n=5; Plasmo...    54   3e-06
UniRef50_Q4UDV1 Cluster: Putative uncharacterized protein; n=3; ...    52   1e-05
UniRef50_A2WMC4 Cluster: Putative uncharacterized protein; n=1; ...    42   0.011
UniRef50_Q5CTX7 Cluster: HSPC021/HSPC025 family protein; n=2; Cr...    33   4.0  
UniRef50_UPI0000498A02 Cluster: SNF7 family protein; n=1; Entamo...    33   5.2  
UniRef50_UPI00006A145A Cluster: Discoidin, CUB and LCCL domain-c...    33   5.2  

>UniRef50_Q7Z5X3 Cluster: EIF3S6IP protein; n=5; Eutheria|Rep:
           EIF3S6IP protein - Homo sapiens (Human)
          Length = 188

 Score =  155 bits (377), Expect = 4e-37
 Identities = 80/134 (59%), Positives = 93/134 (69%)
 Frame = -2

Query: 490 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 311
           NY ++    Q +VF DEV+QQ  L TIRS+LKLYTT+P+AKLA F+       R      
Sbjct: 58  NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 111

Query: 310 AALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHRYGDFF 131
               I LL FK KMKN+VWT G S LDG+FQS  E+D YID DMIHIADTKVA RYGDFF
Sbjct: 112 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 167

Query: 130 IRKLLKFEELNRKL 89
           IR++ KFEELNR L
Sbjct: 168 IRQIHKFEELNRTL 181


>UniRef50_Q9Y262 Cluster: Eukaryotic translation initiation factor 3
           subunit 6-interacting protein; n=47; Eumetazoa|Rep:
           Eukaryotic translation initiation factor 3 subunit
           6-interacting protein - Homo sapiens (Human)
          Length = 564

 Score =  155 bits (377), Expect = 4e-37
 Identities = 80/134 (59%), Positives = 93/134 (69%)
 Frame = -2

Query: 490 NYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREH 311
           NY ++    Q +VF DEV+QQ  L TIRS+LKLYTT+P+AKLA F+       R      
Sbjct: 434 NYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFR------ 487

Query: 310 AALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHRYGDFF 131
               I LL FK KMKN+VWT G S LDG+FQS  E+D YID DMIHIADTKVA RYGDFF
Sbjct: 488 ----IQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFF 543

Query: 130 IRKLLKFEELNRKL 89
           IR++ KFEELNR L
Sbjct: 544 IRQIHKFEELNRTL 557


>UniRef50_Q0DJU1 Cluster: Os05g0227700 protein; n=12;
           Magnoliophyta|Rep: Os05g0227700 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 529

 Score =  101 bits (243), Expect = 8e-21
 Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
 Frame = -2

Query: 511 PPI--EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARG 338
           PP+  EP  NY +DA + Q ++F+ EV+QQ++L  IRSYLKLY+T+ + KLA +M     
Sbjct: 398 PPVLREPYTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSYLKLYSTITIGKLAKYMDV--- 454

Query: 337 SERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTK 158
                  +   L   L+ +K KM ++         DGK  S  + D YID D+IH+ ++K
Sbjct: 455 -------DEVTLRTILMTYKHKMHSI-------DSDGKVISSADFDFYIDEDIIHVVESK 500

Query: 157 VAHRYGDFFIRKLLKFEELNRKLXHIK 77
           +   +GD+F+R++LKFEE+  +L  ++
Sbjct: 501 LTKNHGDYFLRQILKFEEMITQLDKVQ 527


>UniRef50_Q95QW0 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 537

 Score = 94.7 bits (225), Expect = 1e-18
 Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
 Frame = -2

Query: 496 GANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAR 317
           G N  ++ +  QTQ F++ +  Q  LP +R YLKLYTTLP  KLA+FM        D   
Sbjct: 402 GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTLPTKKLASFM--------DVDD 453

Query: 316 EHAALAI-HLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHRYG 140
           EH    I  LL +K  +  +    GPS  D   +   ++D Y+D DMI+IADTKVA   G
Sbjct: 454 EHYDSFIGKLLTYKMIVNELGKEAGPSSADDD-EPQTDIDFYVDRDMINIADTKVARHVG 512

Query: 139 DFFIRKLLKFEELNRKLXHIKI 74
           + FIR + K +E+   L  + I
Sbjct: 513 EHFIRHIQKLQEVQDVLKRLDI 534


>UniRef50_Q2U041 Cluster: RNA polymerase I-associated factor -
           PAF67; n=16; Pezizomycotina|Rep: RNA polymerase
           I-associated factor - PAF67 - Aspergillus oryzae
          Length = 476

 Score = 85.8 bits (203), Expect = 5e-16
 Identities = 49/133 (36%), Positives = 72/133 (54%)
 Frame = -2

Query: 511 PPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSE 332
           PP     +   D V H T +FMDEV+     PTIRSYLKLYTT+ + KLA F+       
Sbjct: 353 PPDFDNPSVNVDPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTTMDLQKLAGFLEV----- 407

Query: 331 RDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVA 152
                E   L   LL  K + + V W +G   L+G+  +  +LD  ++ND+IH+++TK  
Sbjct: 408 -----EPEKLRSWLLVNKQRSRQVRWVEG-GLLEGEPVAANDLDYALENDLIHVSETKAG 461

Query: 151 HRYGDFFIRKLLK 113
            R  D+++R L +
Sbjct: 462 RRLVDWYLRNLAR 474


>UniRef50_Q6CAE9 Cluster: Similar to tr|Q91YE4 Mus musculus 67 kDa
           polymerase-associated factor PAF67; n=1; Yarrowia
           lipolytica|Rep: Similar to tr|Q91YE4 Mus musculus 67 kDa
           polymerase-associated factor PAF67 - Yarrowia lipolytica
           (Candida lipolytica)
          Length = 520

 Score = 85.0 bits (201), Expect = 9e-16
 Identities = 47/134 (35%), Positives = 74/134 (55%)
 Frame = -2

Query: 514 PPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGS 335
           P  I+PG  +G D +KH  ++FM +V        ++SYL LY T+ + KLA+F+      
Sbjct: 378 PKFIQPGDVHGGDPLKHHLKIFMVDVTNTLSTANLKSYLNLYATMDLGKLASFL------ 431

Query: 334 ERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKV 155
           + DA      L   L+  K K + + WT+G    DG +Q   ELD  ++ND+IH+A+ K 
Sbjct: 432 DTDA----EDLRSQLVTLKMKNRQLRWTEGELA-DGTYQHCSELDIALENDLIHVAEAKG 486

Query: 154 AHRYGDFFIRKLLK 113
             ++ D+FIR  +K
Sbjct: 487 GRKFADWFIRNTVK 500


>UniRef50_Q4PF85 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 668

 Score = 78.6 bits (185), Expect = 8e-14
 Identities = 42/118 (35%), Positives = 68/118 (57%)
 Frame = -2

Query: 478 DAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAALA 299
           D  +HQ +VF+ +V+ Q     +RS+L+LYTTL   KLA+F+            +   L 
Sbjct: 470 DPTQHQLRVFLSDVKTQLSNANVRSFLRLYTTLGTDKLASFLEI----------DEEELV 519

Query: 298 IHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHRYGDFFIR 125
             ++  K   +++ W+ G S L G+  +  +LD  ID DM+HIA+++V  RYGD+F+R
Sbjct: 520 EMMMVMKNSTRSLKWSSG-SLLHGQVVNTSDLDFVIDTDMVHIAESRVGRRYGDWFLR 576


>UniRef50_Q86LA2 Cluster: Similar to Xenopus laevis (African clawed
           frog). similar to eukaryotic translation initiation
           factor 3, subunit 6 interacting protein; n=2;
           Dictyostelium discoideum|Rep: Similar to Xenopus laevis
           (African clawed frog). similar to eukaryotic translation
           initiation factor 3, subunit 6 interacting protein -
           Dictyostelium discoideum (Slime mold)
          Length = 611

 Score = 75.8 bits (178), Expect = 6e-13
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
 Frame = -2

Query: 511 PPIEPGANY-GRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGS 335
           PP   G N    D  + Q  +F++EV+QQ +L TIRSY+ LY+T+ + KLA  +      
Sbjct: 482 PPYISGFNVTALDPHRLQLSLFLEEVKQQSLLTTIRSYITLYSTISIQKLAGLLQI---- 537

Query: 334 ERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKV 155
                 +   L + L C+K K+ NV+  KG    + K+ +  ++D YID DMIHI D ++
Sbjct: 538 ------DPEDLRVKLTCYKHKLFNVL-GKG----ETKWNNQLDIDFYIDQDMIHI-DNRL 585

Query: 154 AHRYGDFFIRKLLKFE 107
             +  D FI  +LKFE
Sbjct: 586 YAKETDSFINSILKFE 601


>UniRef50_Q5D9V6 Cluster: SJCHGC08963 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC08963 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 273

 Score = 65.3 bits (152), Expect = 8e-10
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -2

Query: 469 KHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGS---ERDAAREHAALA 299
           + Q  +F  E+ QQ  L  +RSYLKLYT +  +KLA FM+ +  +   +  A +     A
Sbjct: 122 RQQIDLFKTEIAQQIELLRLRSYLKLYTNISASKLANFMNVSEPALHMQLMAYKYRLKQA 181

Query: 298 IHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHRYGDFFIRKL 119
           ++ +     + ++  +  P   +   Q    LD Y+D   I++ADT V  R+ +FFI ++
Sbjct: 182 MNQIDTVGDVNDIQASINPD-FNSSHQMHPHLDFYVDGSTIYVADTIVDRRFSEFFILQV 240

Query: 118 LKFEELNRKL 89
            + ++LN+ L
Sbjct: 241 EQLQQLNKTL 250


>UniRef50_A7T6P9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 221

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -2

Query: 463 QTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFM 353
           Q +VFM+EV QQ M+P IRSYLKLYTT+P+AKLAAF+
Sbjct: 175 QLKVFMNEVAQQSMIPVIRSYLKLYTTMPIAKLAAFL 211


>UniRef50_A4S558 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 502

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 37/130 (28%), Positives = 62/130 (47%)
 Frame = -2

Query: 514 PPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGS 335
           P  +  G     +A K Q + F+D V    ++P +R YL++YT++ + KLAA +      
Sbjct: 356 PKFVASGDGDNSEAHKTQLKAFLDSVATHAVIPKLRGYLRMYTSIKLDKLAALV------ 409

Query: 334 ERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKV 155
           E       A+L   +  +  K     WT G S LDG+     ++   +D D++ + +TK 
Sbjct: 410 ETPVESLKASLKAFVQGYTVK----EWTGGASALDGEEVYCGDMSVILDGDVVRVEETKK 465

Query: 154 AHRYGDFFIR 125
           A    +FF R
Sbjct: 466 AKSAREFFAR 475


>UniRef50_Q5K8M2 Cluster: Eukaryotic translation initiation factor 3
           subunit 6, putative; n=2; Filobasidiella neoformans|Rep:
           Eukaryotic translation initiation factor 3 subunit 6,
           putative - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 631

 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
 Frame = -2

Query: 514 PPPIEPG-------ANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAF 356
           PPP E         AN   DA +   ++F+ +V+  + +  +R+ LKLYT++  AKLAAF
Sbjct: 427 PPPYEDASALEAWLANPPADATQRHLELFLSDVQAVQGVNGMRNLLKLYTSIDAAKLAAF 486

Query: 355 MSAARGSERDAAREHAALAIHLLCFKXKMKNVVWTKGPSG---LDGKFQSGXELDXYIDN 185
             +  G E     E     + +L    K  +  + +G +    LDG+ +    LD  ID 
Sbjct: 487 --SVSGEEE--GEEEVLQQLMVL----KSASSTYGRGQAETTLLDGERKVTNNLDFTIDG 538

Query: 184 DMIHIADTKVAHRYGDFFIRKLLKFEELNRKLXHIK 77
            M+H+ +T    RY  FFIR     E   R L  IK
Sbjct: 539 TMVHVEETTSHRRYAGFFIRNA---EHAQRALTSIK 571


>UniRef50_Q6LFE7 Cluster: Homologue of human HSPC025; n=5;
           Plasmodium|Rep: Homologue of human HSPC025 - Plasmodium
           falciparum (isolate 3D7)
          Length = 656

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
 Frame = -2

Query: 487 YGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHA 308
           Y  D    Q  +F+ +V  QK      SY KLY  + + KLA  M+       D   E  
Sbjct: 406 YSSDPTNRQLAIFLKDVSYQKKAFYFISYAKLYHNIQLKKLANLMNYNELINNDDEHEQE 465

Query: 307 A-LAIHLLCFKXKMKNVVWTKGPSGLDGKFQS--GXELDXYIDNDMIHIADTKVAHRYGD 137
             ++  ++C K   K ++W +GP        S  G   D +ID D+++I        + D
Sbjct: 466 QNVSSDIMCVKNCSKQLIWKEGPLYTGDIINSIFGNSFDFFIDLDIVNIKTRAHQKIFID 525

Query: 136 FFIRKLLKFEELNRKL 89
           +F+ ++   + L   L
Sbjct: 526 YFVHQINMSKNLMNNL 541


>UniRef50_Q4UDV1 Cluster: Putative uncharacterized protein; n=3;
           Piroplasmida|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 549

 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -2

Query: 478 DAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAALA 299
           + ++ Q Q+F++E+ +Q+ +  I SY KLY  + + KL   M+   G + +  R      
Sbjct: 408 EPLQRQVQIFLEEINKQRKVNEIYSYAKLYHNISLKKLGVLMNL--GDDPELLRS----- 460

Query: 298 IHLLCFKXKMKNVVWTKGPSGLDGKFQS-GXELDXYIDNDMIHIADTKVAHRYGDFFIRK 122
             +LC K  ++  V            Q+ G   D YID +++HI   K    Y ++F+++
Sbjct: 461 -QILCAKHHVRQFVSNSFSLYHTNLLQTFGDRDDLYIDQNVLHIKSKKNQKIYAEYFLQQ 519

Query: 121 LLKFEE 104
           + K ++
Sbjct: 520 INKCKQ 525


>UniRef50_A2WMC4 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 624

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 15/38 (39%), Positives = 29/38 (76%)
 Frame = -2

Query: 190 DNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLXHIK 77
           + D+IH+ ++K   R+GD+F+R++LKFEE+  +L  ++
Sbjct: 585 NQDVIHVMESKPIKRHGDYFLRQILKFEEMIGELEKVQ 622


>UniRef50_Q5CTX7 Cluster: HSPC021/HSPC025 family protein; n=2;
           Cryptosporidium|Rep: HSPC021/HSPC025 family protein -
           Cryptosporidium parvum Iowa II
          Length = 673

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -2

Query: 259 VWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTKVAHR-YGDFFIRKLLKFEELNRKL 89
           +W  G        Q   ++D  +D D IHI + K   + +GD F +++LK   L R +
Sbjct: 599 IWKSGDLHSGELVQLNGDVDLLLDLDTIHIIEGKQVDKFFGDIFAKQILKARNLLRHI 656


>UniRef50_UPI0000498A02 Cluster: SNF7 family protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: SNF7 family protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 206

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 140 TIAMSHFRICDMNHIVVDVXIQLXTTLEFSIKTTGAFSPNY 262
           T A+   R+ D++  +VD+  Q+   +E S KTTGA S  Y
Sbjct: 17  THAILESRVTDLDQKIVDLDRQIRQNIEMSHKTTGAESQRY 57


>UniRef50_UPI00006A145A Cluster: Discoidin, CUB and LCCL
           domain-containing protein 2 precursor (Endothelial and
           smooth muscle cell-derived neuropilin-like protein)
           (CUB, LCCL and coagulation factor V/VIII-homology
           domains protein 1).; n=1; Xenopus tropicalis|Rep:
           Discoidin, CUB and LCCL domain-containing protein 2
           precursor (Endothelial and smooth muscle cell-derived
           neuropilin-like protein) (CUB, LCCL and coagulation
           factor V/VIII-homology domains protein 1). - Xenopus
           tropicalis
          Length = 626

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 511 PPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMS 350
           P ++P AN     V+H    F  E++   + PTI   L L T L    + A  S
Sbjct: 350 PVLKPRANNNNSGVRHDKTTFPPEIKNTTVTPTISKDLPLVTILVPVLVMALTS 403


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,826,213
Number of Sequences: 1657284
Number of extensions: 10218288
Number of successful extensions: 20909
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20890
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -