Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0906 - 7124686-7124730,7124854-7124925,7125257-7125383,712...    99   2e-21
05_03_0041 - 7662094-7662138,7662269-7662340,7663144-7663179,766...    89   3e-18
12_02_0748 - 22749911-22750135,22752142-22752358,22753177-22753337     29   3.0  
01_01_0980 + 7754841-7754971,7757048-7757330,7757435-7757640,775...    29   3.0  
02_01_0524 + 3798019-3798265,3798419-3798651,3798765-3799014,379...    28   5.2  
01_06_0861 - 32528419-32529102                                         28   5.2  
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443...    27   9.1  

>01_01_0906 -
           7124686-7124730,7124854-7124925,7125257-7125383,
           7125424-7125572,7126126-7126465,7126759-7127090,
           7127327-7127860
          Length = 532

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 56/150 (37%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
 Frame = -2

Query: 514 PPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARG 338
           PP ++ P  NY +DA + Q ++F+ EV+QQ++L  IRSYLKLY+T+ +AKLA +M     
Sbjct: 390 PPALDQPLTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSYLKLYSTITIAKLAQYMEVDEA 449

Query: 337 SERDAAREHAALAIH---LLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIA 167
           + R  A ++ +  ++   L+ +K KM  V         +GK  S  + D YI  D+IH+ 
Sbjct: 450 TLR--AMKNLSQYLYRSILMTYKHKMHAV-------DNNGKIVSSADFDFYIKEDVIHVM 500

Query: 166 DTKVAHRYGDFFIRKLLKFEELNRKLXHIK 77
           ++K   R+GD+F+R++LKFEE+  +L  ++
Sbjct: 501 ESKPIKRHGDYFLRQILKFEEMIGELEKVQ 530


>05_03_0041 -
           7662094-7662138,7662269-7662340,7663144-7663179,
           7663356-7663449,7663533-7663681,7664525-7664864,
           7666417-7666748,7667348-7667821
          Length = 513

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 14/159 (8%)
 Frame = -2

Query: 511 PPI--EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARG 338
           PP+  EP  NY +DA + Q ++F+ EV+QQ++L  IRSYLKLY+T+ + KLA +M     
Sbjct: 370 PPVLREPYTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSYLKLYSTITIGKLAKYMDV--- 426

Query: 337 SERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYID---------- 188
                  +   L   L+ +K KM ++         DGK  S  + D YID          
Sbjct: 427 -------DEVTLRTILMTYKHKMHSI-------DSDGKVISSADFDFYIDECMQQPLVWF 472

Query: 187 --NDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLXHIK 77
              D+IH+ ++K+   +GD+F+R++LKFEE+  +L  ++
Sbjct: 473 PAEDIIHVVESKLTKNHGDYFLRQILKFEEMITQLDKVQ 511


>12_02_0748 - 22749911-22750135,22752142-22752358,22753177-22753337
          Length = 200

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -2

Query: 367 LAAFMSAARGSERDAAREHAALAIHLLCFKXKMKNVVW 254
           LA F   A G+        AA A+HLLCF       VW
Sbjct: 6   LAVFFLLAGGAGLGMTAAAAAKAVHLLCFATSWGVTVW 43


>01_01_0980 +
           7754841-7754971,7757048-7757330,7757435-7757640,
           7757687-7757879,7758912-7759104,7759555-7759589
          Length = 346

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 475 HHGHSWHRVQWAGGH 519
           HHGH+W RV   GGH
Sbjct: 306 HHGHTWLRVCLHGGH 320


>02_01_0524 +
           3798019-3798265,3798419-3798651,3798765-3799014,
           3799104-3799249,3799372-3799577,3799721-3799845,
           3800154-3800734
          Length = 595

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 487 YGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKL 392
           YGR  +    +   +E++Q+ M PT++S++ L
Sbjct: 395 YGRAGLHEDAEAVFEELKQRGMSPTMKSHMLL 426


>01_06_0861 - 32528419-32529102
          Length = 227

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 296 NGESRMFTCRVTLTAASSRHECS*FRHREGGV*FQIGTYGRKH 424
           + E R+ T R T +  S     + + HR GG+ F+  TYGR H
Sbjct: 10  SAEERVLTVRKT-SHFSPGDGFAAYDHRTGGLAFRADTYGRGH 51


>08_01_0509 +
           4433837-4434437,4434564-4434636,4435408-4437367,
           4437721-4437990,4438168-4438605,4438772-4439043,
           4439126-4439274,4439339-4439470,4439554-4439880,
           4439963-4440357,4440551-4440861,4441304-4441394,
           4441806-4441847
          Length = 1686

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 256 WTKGPSGLDGKFQSGXELDXY 194
           WT+ P GL GK QS  EL+ +
Sbjct: 601 WTRFPDGLIGKMQSLEELEEF 621


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,253,329
Number of Sequences: 37544
Number of extensions: 308411
Number of successful extensions: 657
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)