Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B06f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...   199   2e-51
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...   199   2e-51
AY075492-1|AAL68302.1|  231|Drosophila melanogaster RE47547p pro...    28   6.7  
AE014297-3056|AAN13888.1|  361|Drosophila melanogaster CG31431-P...    28   6.7  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score =  199 bits (485), Expect = 2e-51
 Identities = 96/148 (64%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
 Frame = -2

Query: 514 PPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARG 338
           PP ++ P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ KLA+F+     
Sbjct: 397 PPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFIDP-NA 455

Query: 337 SERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTK 158
           SE D ++    L I LLCFK KM+N+VW+KGPSGL+G F+SG ELD YID+DMIHIADTK
Sbjct: 456 SEDDVSK----LLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYIDDDMIHIADTK 511

Query: 157 VAHRYGDFFIRKLLKFEELNRKLXHIKI 74
           V+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 512 VSHRYGDFFVRKILKFNDLNRKLKNINI 539


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score =  199 bits (485), Expect = 2e-51
 Identities = 96/148 (64%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
 Frame = -2

Query: 514 PPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARG 338
           PP ++ P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ KLA+F+     
Sbjct: 397 PPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFIDP-NA 455

Query: 337 SERDAAREHAALAIHLLCFKXKMKNVVWTKGPSGLDGKFQSGXELDXYIDNDMIHIADTK 158
           SE D ++    L I LLCFK KM+N+VW+KGPSGL+G F+SG ELD YID+DMIHIADTK
Sbjct: 456 SEDDVSK----LLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYIDDDMIHIADTK 511

Query: 157 VAHRYGDFFIRKLLKFEELNRKLXHIKI 74
           V+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 512 VSHRYGDFFVRKILKFNDLNRKLKNINI 539


>AY075492-1|AAL68302.1|  231|Drosophila melanogaster RE47547p
           protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +2

Query: 137 VTIAMSHFRICDMNHIVVD----VXIQLXTTLEFSIKTTGAFSPNYVLHFXLEAXQVNGE 304
           VT   S    C +N  + D    V +QL  T +  +K T   +P +V  +      + G 
Sbjct: 109 VTERYSGLYKCSINPHIWDKAQAVDVQLVRTYQLDVKNTSLAAPEFVDSYPNNKTTLVGS 168

Query: 305 SRMFTCRV 328
             +F CRV
Sbjct: 169 RVVFQCRV 176


>AE014297-3056|AAN13888.1|  361|Drosophila melanogaster CG31431-PA
           protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +2

Query: 137 VTIAMSHFRICDMNHIVVD----VXIQLXTTLEFSIKTTGAFSPNYVLHFXLEAXQVNGE 304
           VT   S    C +N  + D    V +QL  T +  +K T   +P +V  +      + G 
Sbjct: 109 VTERYSGLYKCSINPHIWDKAQAVDVQLVRTYQLDVKNTSLAAPEFVDSYPNNKTTLVGS 168

Query: 305 SRMFTCRV 328
             +F CRV
Sbjct: 169 RVVFQCRV 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,488,223
Number of Sequences: 53049
Number of extensions: 517599
Number of successful extensions: 952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)