Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    27   0.13 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.13 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 171 ILFDSPLTLILGQNGCGKTTIIECLRY 251
           + +   L  ILG +G GKTT++  L +
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNTLTF 126


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 171 ILFDSPLTLILGQNGCGKTTIIECLRY 251
           + +   L  ILG +G GKTT++  L +
Sbjct: 100 VAYPGELLAILGSSGAGKTTLLNTLTF 126


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 15/63 (23%), Positives = 26/63 (41%)
 Frame = -2

Query: 412 KAVTFMDLVTSNCLSFALTIFNFT*PSTSVDLFTFAS*TKHSFLLPGGI*PVIAYLKHSI 233
           K + F++      L+  +T+F F    T +  F   S    SF+  G        LK S 
Sbjct: 88  KRLIFIECFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSY 147

Query: 232 IVV 224
           +++
Sbjct: 148 LII 150


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 15/63 (23%), Positives = 26/63 (41%)
 Frame = -2

Query: 412 KAVTFMDLVTSNCLSFALTIFNFT*PSTSVDLFTFAS*TKHSFLLPGGI*PVIAYLKHSI 233
           K + F++      L+  +T+F F    T +  F   S    SF+  G        LK S 
Sbjct: 88  KRLIFIECFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSY 147

Query: 232 IVV 224
           +++
Sbjct: 148 LII 150


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 428 KISNPGFFSFYC 463
           K +NPG++ F+C
Sbjct: 593 KATNPGYWLFHC 604


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 428 KISNPGFFSFYC 463
           + +NPGF+ F+C
Sbjct: 660 RANNPGFWLFHC 671


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 217 HPFCPNISVNGESNSMRCSSVSSGP 143
           +PF      NG+S++ R   VS  P
Sbjct: 194 NPFAKGFRENGKSSAKRKQLVSEHP 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,271
Number of Sequences: 336
Number of extensions: 2708
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)