Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314B04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 108 2e-24
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 32 0.24
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 32 0.32
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 32 0.32
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830 31 0.56
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 0.56
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 30 1.3
09_02_0068 - 3832858-3833228,3835773-3836223 30 1.3
09_01_0095 - 1403586-1403987,1406687-1406722,1406995-1407012,140... 29 1.7
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 29 1.7
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 3.0
03_02_0859 - 11853928-11854138,11854225-11854683,11854760-118549... 28 4.0
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 28 4.0
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644... 28 5.2
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 28 5.2
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 27 6.9
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 27 6.9
12_02_0038 - 12630564-12630580,12630789-12631260 27 9.1
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49... 27 9.1
11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44... 27 9.1
09_02_0610 - 11206198-11206588,11206812-11207001,11207116-112071... 27 9.1
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 27 9.1
09_01_0131 - 1966406-1966425,1967469-1967901 27 9.1
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 27 9.1
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 27 9.1
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 108 bits (260), Expect = 2e-24
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Frame = +3
Query: 99 MAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPG 278
M+ V + I+GIRSF PE+ + I F PLTLI+G NG GKTTIIECL+ + TG++PP
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNV--ITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPN 58
Query: 279 SRN-ECFVHDAKVNRSTEVLGQVKLKIVNAKDKQLEVTRSMKVTALAKKKTKFQTLDSFL 455
SR+ FVHD KV TE GQ+KL+ A K + RS ++T A K +F+ ++S L
Sbjct: 59 SRSGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKA-SKMEFKAIESVL 117
Query: 456 STVD 467
T++
Sbjct: 118 QTIN 121
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 159 DEQRILFDSPLTLILGQNGCGKTTIIECL 245
D IL S LTL+LG GCGKTT++ L
Sbjct: 177 DVTGILKPSRLTLLLGPPGCGKTTLLLAL 205
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 171 ILFDSPLTLILGQNGCGKTTIIECL 245
I+ S +TL+LG GCGKTT+++ L
Sbjct: 27 IIKPSRITLLLGPPGCGKTTLLKAL 51
>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 150 EDTDEQRILFDSPLT-LILGQNGCGKTTII 236
E TDE++ + PLT ILG++G GKTT++
Sbjct: 1002 ELTDEEQAIIRFPLTSFILGRSGTGKTTVL 1031
>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
Length = 160
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNRSTEVLGQVKLKIVNAK 368
L L+LG NG GK++++ + A+ PG A V R E G VK+ +
Sbjct: 61 LNLVLGPNGSGKSSLVCAIALALAAD--PGVLGRVASVGAFVKRGEE-SGHVKISLAGTH 117
Query: 369 DKQLEVTRSMKV 404
L +R +
Sbjct: 118 PNTLSASRGRSI 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 126 RGIRSFGPEDTDEQRILFD--SPLTLILGQNGCGKTTIIECLR 248
RG GP DE + D SP+ ILG GKT +++C+R
Sbjct: 678 RGASKKGPIKEDETKNGSDLRSPICCILGHVDTGKTKLLDCIR 720
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 180 DSPLTLILGQNGCGKTTIIECL 245
DS + ++LG+NG GKTT I L
Sbjct: 372 DSQIVVMLGENGTGKTTFIRML 393
>09_02_0068 - 3832858-3833228,3835773-3836223
Length = 273
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 198 ILGQNGCGKTTIIECLRYAITGQMPPGSR 284
I+G +GCGKTT+++ L A+ PP ++
Sbjct: 134 IMGPSGCGKTTLLDTLA-AVAAVTPPEAK 161
>09_01_0095 -
1403586-1403987,1406687-1406722,1406995-1407012,
1407331-1407513
Length = 212
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRNE 290
LT ILG + C IEC Y Q+ G+R+E
Sbjct: 49 LTAILGDDICDARVAIECSAYRCNPQLAIGARDE 82
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 180 DSPLTLILGQNGCGKTTIIECL 245
DS + ++LG+NG GKTT I L
Sbjct: 376 DSQIIVMLGENGTGKTTFIRML 397
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 287
LT ++G +G GKTT+++ L TG GS N
Sbjct: 900 LTALMGVSGAGKTTLMDVLAGRKTGGYIEGSIN 932
>03_02_0859 -
11853928-11854138,11854225-11854683,11854760-11854991,
11855064-11855187,11855276-11855960,11856429-11856735,
11856832-11858188
Length = 1124
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 93 YNMAGVKSLAIRGIRSFGPEDTDEQRILFDSPLTLILGQNG 215
Y+ G+++L I G+R E+ E ++ ++ T +LG+ G
Sbjct: 616 YSSLGLRTLVI-GVRELSQEEFQEWQMAYEKASTALLGRGG 655
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGS 281
LT ++G +G GKTT+++ L TG + GS
Sbjct: 891 LTALVGVSGAGKTTLMDVLAGRKTGGLIEGS 921
>04_01_0490 -
6440176-6440448,6440785-6441074,6441156-6441304,
6441432-6441890,6441973-6442269,6442604-6443502,
6443793-6443827,6443984-6444078,6444184-6444247,
6446099-6446175,6446330-6446514
Length = 940
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRNECFVHDAKVNRSTEVLGQV-KLKIVNA 365
+T ++G +G GKTT + + + G GS HD + +++G V + +V+
Sbjct: 379 VTAVMGPSGAGKTTFLNAVTGKVAGYKVSGSVLVNGRHD-NIRSYKKIIGFVPQDDVVHG 437
Query: 366 K---DKQLEVTRSMKVTALAKKKTKFQTLDSFLSTVDESG 476
++ L + +++A + K T++ + ++D G
Sbjct: 438 NLTVEENLWFSAKCRLSATTAHRHKVLTVERVIDSLDLQG 477
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPGSRN 287
LT ++G +G GKTT+++ L TG G+ N
Sbjct: 1135 LTALMGFSGAGKTTLMDVLAGRKTGGYTEGTIN 1167
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIECLRYAITGQMPPG 278
+TL+LG G GKTT++ A+ G +P G
Sbjct: 76 MTLLLGPPGAGKTTLL----LALAGNVPSG 101
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 189 LTLILGQNGCGKTTIIE 239
L ++LG NGCGK+T+++
Sbjct: 76 LWMLLGPNGCGKSTLLK 92
>12_02_0038 - 12630564-12630580,12630789-12631260
Length = 162
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 198 ILGQNGCGKTTIIECL 245
I+G +GCGKTT+++ L
Sbjct: 141 IMGPSGCGKTTLLDTL 156
>12_01_0059 +
494876-494924,496060-496211,496344-496531,496971-497027,
497123-497282,497389-497457,497712-497837,497972-498091
Length = 306
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 378 LEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDIL 521
LEV + A+K +Q+ D+ LS++DE+G K +S C+D ++L
Sbjct: 96 LEVHELVIARTQARKCRDYQSADALLSSLDEAG-YKIIS--CSDDEVL 140
>11_01_0058 +
438000-438230,438847-438902,440003-440117,440314-440424,
442331-442518,442957-443013,443109-443268,443368-443436,
443580-443699
Length = 368
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 378 LEVTRSMKVTALAKKKTKFQTLDSFLSTVDESGKTKDVSSRCADLDIL 521
LEV + A+K +Q+ D+ LS++DE+G K +S C+D ++L
Sbjct: 200 LEVHELVIARTQARKCRDYQSADALLSSLDEAG-YKIIS--CSDDEVL 244
>09_02_0610 -
11206198-11206588,11206812-11207001,11207116-11207184,
11207546-11207672,11207809-11208128,11208196-11208353,
11208503-11208580,11209484-11209555,11209994-11210135,
11212580-11213064,11214362-11214947,11215093-11215177
Length = 900
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 441 GFEILSFSWLRQSPSWTLSPPTV 373
G ++S++W Q P T PP V
Sbjct: 541 GISLISYNWFMQKPVSTFDPPRV 563
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 81 ENLTYNMAGVKSLAIRGIRSFGPEDTDEQRILF-DSPLTLILGQNGCGKTTIIECL 245
E++ Y++ K+L ++G+ E + F LT ++G +G GKTT+++ L
Sbjct: 669 EDIRYSIDMPKALKVQGMAGSRLELLKDLSGSFRPGVLTALMGISGAGKTTLLDVL 724
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 198 ILGQNGCGKTTIIECL 245
I+G +GCGKTT+++ L
Sbjct: 128 IMGPSGCGKTTLLDTL 143
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 183 SPLTLILGQNGCGKTTIIECL 245
S +TL+LG G GKTT+++ L
Sbjct: 111 SRMTLLLGAPGSGKTTLLKAL 131
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 183 SPLTLILGQNGCGKTTIIECLR 248
SP+ ILG GKT +++C+R
Sbjct: 422 SPICCILGHVDTGKTKLLDCIR 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,616,579
Number of Sequences: 37544
Number of extensions: 259195
Number of successful extensions: 769
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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