Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314B04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    27   0.088
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   3.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   3.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 0.088
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 159 DEQRILFDSPLTLILGQNGCGKTTIIECLRYAITGQMPPGSRNEC 293
           +E +++   P+  I+G    GKTT+++ LR     +   G   +C
Sbjct: 137 NESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAKSEFGGITQC 181


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 171 ILFDSPLTLILGQNGCGKTTIIECL 245
           IL +SP  +ILGQ+   K  ++  L
Sbjct: 22  ILANSPAIIILGQDSKAKAIVVNTL 46


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 171 ILFDSPLTLILGQNGCGKTTIIECL 245
           IL +SP  +ILGQ+   K  ++  L
Sbjct: 60  ILANSPAIIILGQDSKAKAIVVNTL 84


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 213 GCGKTTIIECLRYAITGQMP 272
           GCG+ T   CL Y +    P
Sbjct: 132 GCGERTEGRCLHYTVDKSKP 151



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 244 KHSIIVVLPHPFCPNISVNGES 179
           KH+      H  CP++   GES
Sbjct: 53  KHTDACCRTHDMCPDVMSAGES 74


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 213 GCGKTTIIECLRYAITGQMP 272
           GCG+ T   CL Y +    P
Sbjct: 137 GCGERTEGRCLHYTVDKSKP 156



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 244 KHSIIVVLPHPFCPNISVNGES 179
           KH+      H  CP++   GES
Sbjct: 58  KHTDACCRTHDMCPDVMSAGES 79


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 213 GCGKTTIIECLRYAITGQMP 272
           GCG+ T   CL Y +    P
Sbjct: 137 GCGERTEGRCLHYTVDKSKP 156



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 244 KHSIIVVLPHPFCPNISVNGES 179
           KH+      H  CP++   GES
Sbjct: 58  KHTDACCRTHDMCPDVMSAGES 79


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 329 STRSSEIKDCQCKRQTVGGDKVHEGDC 409
           ST  SE     CK  + GG+     DC
Sbjct: 20  STILSESAGTSCKWLSEGGNDTRSADC 46


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/46 (19%), Positives = 22/46 (47%)
 Frame = -2

Query: 217 HPFCPNISVNGESNSMRCSSVSSGPKLLIPLIASDFTPAILYVRFS 80
           +P+C N++ N  S     +++    K+     + D     +Y+R++
Sbjct: 218 YPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRWN 263


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 225 FYHIHFALISALMENQIVCVVRRYL 151
           FY+  F + S+L    I C++  +L
Sbjct: 338 FYNTDFIIYSSLSSFYIPCIIMVFL 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,941
Number of Sequences: 438
Number of extensions: 2825
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)